Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq13355 158 9e-33 >seq13355 Length=2242 Score = 158 bits (174), Expect = 9e-33 Identities = 150/192 (78%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 518169 TATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAA 518228 |||| |||||| | || || |||||||||||||| |||||||| ||||| ||||| | Sbjct 804 TATCTAGACCAAATGCCAATGCAGCAGCAGTTGGCTCATTAATTATTCTTTTTACATTTA 863 Query 518229 GACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAG 518288 ||| |||||| |||| ||||||||||| || |||||||| ||| |||||||| |||| Sbjct 864 AACCTGCAATTTTTCCAGCATCTTTAGTTGCCTGTCTTTGACTATCATTAAAATAAGCAG 923 Query 518289 GAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCA 518348 | || || ||||| |||||||||||||||| ||| | ||| | || |||| |||| Sbjct 924 GCACTGTTATAACAGCATCAGTTACTTCTTCACCCAAGTAATCCTCAGCTGTTTTCTTCA 983 Query 518349 TTTTACTTAAAA 518360 |||| || ||| Sbjct 984 TTTTTTTTTAAA 995 Score = 87.8 bits (96), Expect = 1e-11 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 322239 CTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAAC 322298 ||| ||| |||| | || || |||||||| |||||||||||| | |||| ||||| Sbjct 807 CTAGACCAAATGCCAATGCAGCAGCAGTTGGCTCATTAATTATTCTTTTTACATTTAAAC 866 Query 322299 CCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTA 322358 | |||||||| ||| ||| |||||| ||||| || ||||||||||| || || | Sbjct 867 CTGCAATTTTTCCAGCATCTTTAGTTGCCTGTCTTTGACTATCATTAAAATAAGCAGGCA 926 Query 322359 CAGTAATAACTGC 322371 | || ||||| || Sbjct 927 CTGTTATAACAGC 939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3779961981705334