Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq13355 107 2e-17 >seq13355 Length=2242 Score = 107 bits (118), Expect = 2e-17 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 550344 TTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAG 550403 ||| || |||||||| ||||||| | || | ||| ||||||| || ||||| | Sbjct 995 TTTAAAAAAAAATGAAGAAAACAGCTGAGGATTACTTGGGTGAAGAAGTAACTGATGCTG 936 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | ||||| || || || ||||||||||| ||| | || || ||||||||||||||| Sbjct 935 TTATAACAGTGCCTGCTTATTTTAATGATAGTCAAAGACAGGCAACTAAAGATGCTGGAA 876 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 ||||| || | ||||| | || || ||||| || |||||||||||| | |||| Sbjct 875 AAATTGCAGGTTTAAATGTAAAAAGAATAATTAATGAGCCAACTGCTGCTGCATTGGCAT 816 Query 550524 ATGGACTTGATA 550535 ||| || |||| Sbjct 815 TTGGTCTAGATA 804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028379035481110