Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq8097 138 3e-27 >seq8097 Length=1361 Score = 138 bits (152), Expect = 3e-27 Identities = 284/419 (68%), Gaps = 10/419 (2%) Strand=Plus/Plus Query 150358 AATTCAGATTCTTTCTCGTAAAACCAAAAAGAATGGTGCGTTAGTTGGTGAACCAGGTGT 150417 |||||||||| | |||| ||| ||||| ||| || ||| ||||||||||||| || Sbjct 184 AATTCAGATTTTACAACGTAGAACTAAAAATAATCCTGTTTTAATTGGTGAACCAGGGGT 243 Query 150418 TGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGA 150477 ||||||||| ||| || || || ||||| ||| | || | ||||| || || || || Sbjct 244 TGGTAAAACCGCAATTGTAGAAGGTTTAGCTCAAAGGATAGTAAATGGAGAAGTGCCTGA 303 Query 150478 TTCTATGAAAGATGTTGAAA--TTCTTTCTTTGAATATGGGTGCATTTACTGCTGGTACT 150535 | | |||| || ||| | | ||| | |||| | | | || | |||||| || Sbjct 304 TAACTTAAAAG--GTAAAAAGGTATTATCTCTAGATATTGCTTCTTTAATAGCTGGTGCT 361 Query 150536 AAGTATCGTGGTGAATTCGAAGAACGTGTAGACAATTTGCTACAAGAACTA---AAAGAA 150592 || |||||||| ||||| || ||| | || | | | | ||||| || | || Sbjct 362 AAATATCGTGGAGAATTTGAGGAAAGGTTAAAATCTGTTTTGAAAGAATTATCCATTGAT 421 Query 150593 CGCGATGATGTTATTCTGTTCATCGATGAAATCCATACTATTATGGGTGCTGGTGCGACT 150652 | || || |||| | || || || ||| | |||||||| |||||||||||| ||| Sbjct 422 GGAAATAATAGTATTTTATTTATTGACGAATTGCATACTATCATGGGTGCTGGTAAAACT 481 Query 150653 GGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCTATCTCGCGGTGAAATT 150712 | ||||| ||||| | |||||||| || |||||| || | | |||||| | Sbjct 482 ---GAAGGTTCAATGGATGCAGGTAATATGTTGAAGCCTGCTTTAGCAAGAGGTGAATTA 538 Query 150713 CGTGTCATCGGTGCAACAACCTACGATGAATATCGTAAACACATTGAAAAAGATGCAGC 150771 | | || || ||||| || | || || ||| | ||| | || ||||||||||| || Sbjct 539 CATTGTATTGGAGCAACTACATTAGACGAGTATAGGAAATATATAGAAAAAGATGCTGC 597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147335455978822