Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq15380 104 7e-17 seq10209 104 7e-17 seq6928 104 7e-17 >seq15380 Length=3290 Score = 104 bits (114), Expect = 7e-17 Identities = 495/778 (64%), Gaps = 13/778 (2%) Strand=Plus/Minus Query 155571 ACAAACATACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG 155630 |||||| | | || | || || || || || || || || ||||| | | | | || Sbjct 1340 ACAAACTTGCTGAGGGCGATGGAGGCGAGGTTGCAGACGGCGGTCTCATCCTTGGAGGTG 1281 Query 155631 TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTA 155690 || || | |||||| |||||| || || | ||||||||| || ||||||||||| || Sbjct 1280 TACTCGATAATCTCCGTGCACAGATTGGAGCACTTGATGGTACCCAAATTCTTCTGATTG 1221 Query 155691 GATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCG 155750 ||||| |||| || || |||||||| || ||| | ||| || ||||| |||| | Sbjct 1220 GATTTCTTGTTGCAGGCGTCCTTGTACAGCATGAAAGGGACGCCGGTCTCGGTCTGGGAC 1161 Query 155751 TCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGAC 155810 || |||| | ||| | ||| | || ||| |||| | | || | | Sbjct 1160 ATGAGGATCTCAAACCACAAGTCCTGCGCCGGAATCGTCTTGACGCCCATTCCCTTCTTT 1101 Query 155811 TCATATTTCATATACAGC-GTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCA 155869 || || | | ||| | | ||| | ||||| ||||| || || ||||| || | ||| Sbjct 1100 TCGTACTCCTCGTACTTCCGCTCGA-ACTCCTCGCCGTAGCAGTCGCTCAGGCCTGTGCA 1042 Query 155870 CTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATC 155929 | | |||| | ||||| ||| | | | | ||||||| ||| || | ||| Sbjct 1041 CACGTTGGGGTCCATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATC 982 Query 155930 ACTCGCCCAAATAGCATAGAAAAGGTCCCTTGC-CTTTGACTCCTCATCGCCG-TGATTC 155987 | ||||| || || || || || | || | ||| ||||| | ||| || ||| Sbjct 981 AGGAATCCAAAGGGCGTAAAACAGATCGCGGGCACGTTGG-TCCTCCTTACCGGTGTTTC 923 Query 155988 --TTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045 ||| | | | ||| || | || | || ||||| || |||| || | Sbjct 922 GCTTCAGGCGGAC---GAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGA 866 Query 156046 AACTACCATTCCTCTT---GCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102 | ||| || | ||| ||||||||| || || || || || || |||||||| |||| Sbjct 865 AGGCACCCTTACGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACAC 806 Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162 ||||| || | | ||| ||||| || || || || ||| || | ||| || | Sbjct 805 GGAGCATGGGCACGAGACCGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACCGGAAG 746 Query 156163 AGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATT 156222 |||| | || |||| || | ||||||||||| | | ||| || ||||| | Sbjct 745 AGCGGATGTTGTGAACGTGGAACCCAATACCACCGGCCGCCTTACTGATGGTGGCGCACT 686 Query 156223 CCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACG 156282 |||| | || | | |||| || || ||| || || | ||| | | || |||| | Sbjct 685 CCTTGAGGGTGTCGTAAATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAGG 626 Query 156283 AACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAA 156340 |||| | ||||| || || || |||||||| || ||||| || || || |||| Sbjct 625 AACTCATCTGAGGCTTCGGGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGGTAAA 568 >seq10209 Length=2565 Score = 104 bits (114), Expect = 7e-17 Identities = 495/778 (64%), Gaps = 13/778 (2%) Strand=Plus/Minus Query 155571 ACAAACATACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG 155630 |||||| | | || | || || || || || || || || ||||| | | | | || Sbjct 1513 ACAAACTTGCTGAGGGCGATGGAGGCGAGGTTGCAGACGGCGGTCTCATCCTTGGAGGTG 1454 Query 155631 TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTA 155690 || || | |||||| |||||| || || | ||||||||| || ||||||||||| || Sbjct 1453 TACTCGATAATCTCCGTGCACAGATTGGAGCACTTGATGGTACCCAAATTCTTCTGATTG 1394 Query 155691 GATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCG 155750 ||||| |||| || || |||||||| || ||| | ||| || ||||| |||| | Sbjct 1393 GATTTCTTGTTGCAGGCGTCCTTGTACAGCATGAAAGGGACGCCGGTCTCGGTCTGGGAC 1334 Query 155751 TCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGAC 155810 || |||| | ||| | ||| | || ||| |||| | | || | | Sbjct 1333 ATGAGGATCTCAAACCACAAGTCCTGCGCCGGAATCGTCTTGACGCCCATTCCCTTCTTT 1274 Query 155811 TCATATTTCATATACAGC-GTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCA 155869 || || | | ||| | | ||| | ||||| ||||| || || ||||| || | ||| Sbjct 1273 TCGTACTCCTCGTACTTCCGCTCGA-ACTCCTCGCCGTAGCAGTCGCTCAGGCCTGTGCA 1215 Query 155870 CTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATC 155929 | | |||| | ||||| ||| | | | | ||||||| ||| || | ||| Sbjct 1214 CACGTTGGGGTCCATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATC 1155 Query 155930 ACTCGCCCAAATAGCATAGAAAAGGTCCCTTGC-CTTTGACTCCTCATCGCCG-TGATTC 155987 | ||||| || || || || || | || | ||| ||||| | ||| || ||| Sbjct 1154 AGGAATCCAAAGGGCGTAAAACAGATCGCGGGCACGTTGG-TCCTCCTTACCGGTGTTTC 1096 Query 155988 --TTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045 ||| | | | ||| || | || | || ||||| || |||| || | Sbjct 1095 GCTTCAGGCGGAC---GAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGA 1039 Query 156046 AACTACCATTCCTCTT---GCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102 | ||| || | ||| ||||||||| || || || || || || |||||||| |||| Sbjct 1038 AGGCACCCTTACGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACAC 979 Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162 ||||| || | | ||| ||||| || || || || ||| || | ||| || | Sbjct 978 GGAGCATGGGCACGAGACCGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACCGGAAG 919 Query 156163 AGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATT 156222 |||| | || |||| || | ||||||||||| | | ||| || ||||| | Sbjct 918 AGCGGATGTTGTGAACGTGGAACCCAATACCACCGGCCGCCTTACTGATGGTGGCGCACT 859 Query 156223 CCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACG 156282 |||| | || | | |||| || || ||| || || | ||| | | || |||| | Sbjct 858 CCTTGAGGGTGTCGTAAATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAGG 799 Query 156283 AACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAA 156340 |||| | ||||| || || || |||||||| || ||||| || || || |||| Sbjct 798 AACTCATCTGAGGCTTCGGGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGGTAAA 741 >seq6928 Length=4025 Score = 104 bits (114), Expect = 7e-17 Identities = 495/778 (64%), Gaps = 13/778 (2%) Strand=Plus/Plus Query 155571 ACAAACATACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG 155630 |||||| | | || | || || || || || || || || ||||| | | | | || Sbjct 1848 ACAAACTTGCTGAGGGCGATGGAGGCGAGGTTGCAGACGGCGGTCTCATCCTTGGAGGTG 1907 Query 155631 TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTA 155690 || || | |||||| |||||| || || | ||||||||| || ||||||||||| || Sbjct 1908 TACTCGATAATCTCCGTGCACAGATTGGAGCACTTGATGGTACCCAAATTCTTCTGATTG 1967 Query 155691 GATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCG 155750 ||||| |||| || || |||||||| || ||| | ||| || ||||| |||| | Sbjct 1968 GATTTCTTGTTGCAGGCGTCCTTGTACAGCATGAAAGGGACGCCGGTCTCGGTCTGGGAC 2027 Query 155751 TCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGAC 155810 || |||| | ||| | ||| | || ||| |||| | | || | | Sbjct 2028 ATGAGGATCTCAAACCACAAGTCCTGCGCCGGAATCGTCTTGACGCCCATTCCCTTCTTT 2087 Query 155811 TCATATTTCATATAC-AGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCA 155869 || || | | ||| || || | | ||||| ||||| || || ||||| || | ||| Sbjct 2088 TCGTACTCCTCGTACTTCCGCTC-GAACTCCTCGCCGTAGCAGTCGCTCAGGCCTGTGCA 2146 Query 155870 CTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATC 155929 | | |||| | ||||| ||| | | | | ||||||| ||| || | ||| Sbjct 2147 CACGTTGGGGTCCATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATC 2206 Query 155930 ACTCGCCCAAATAGCATAGAAAAGGTCCCTTGC-CTTTGACTCCTCATCGCC-GTGATT- 155986 | ||||| || || || || || | || | ||| ||||| | || ||| || Sbjct 2207 AGGAATCCAAAGGGCGTAAAACAGATCGCGGGCACGTTG-GTCCTCCTTACCGGTGTTTC 2265 Query 155987 -CTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045 |||| || | ||| || | || | || ||||| || |||| || | Sbjct 2266 GCTTC---AGGCGGACGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGA 2322 Query 156046 AACTACCATTCCTCTT---GCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102 | ||| || | ||| ||||||||| || || || || || || |||||||| |||| Sbjct 2323 AGGCACCCTTACGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACAC 2382 Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162 ||||| || | | ||| ||||| || || || || ||| || | ||| || | Sbjct 2383 GGAGCATGGGCACGAGACCGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACCGGAAG 2442 Query 156163 AGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATT 156222 |||| | || |||| || | ||||||||||| | | ||| || ||||| | Sbjct 2443 AGCGGATGTTGTGAACGTGGAACCCAATACCACCGGCCGCCTTACTGATGGTGGCGCACT 2502 Query 156223 CCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACG 156282 |||| | || | | |||| || || ||| || || | ||| | | || |||| | Sbjct 2503 CCTTGAGGGTGTCGTAAATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAGG 2562 Query 156283 AACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAA 156340 |||| | ||||| || || || |||||||| || ||||| || || || |||| Sbjct 2563 AACTCATCTGAGGCTTCGGGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGGTAAA 2620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471490626981243