Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq6220 105 5e-18 seq15740 82.4 6e-11 seq7780 82.4 6e-11 seq6241 82.4 6e-11 >seq6220 Length=1461 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||| |||||||| || |||||||| ||||| || ||| || |||| |||||| Sbjct 818 AACATGCAGATTTTTGTGAAGACTTTAACCGGCAAGACGATTGCCCTCGAGGTGGAGGCG 759 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 |||| || ||| | || || ||||| || || || ||| | || || Sbjct 758 AGCGACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGAC 699 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 |||||| | || |||| || || || ||||||||||| | | || | ||||||||| Sbjct 698 CAGCAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTAC 639 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 ||||| || |||||||| ||| ||||| | ||| Sbjct 638 AACATCCAGAAGGAGTCGACGCTGCACCTCGTG 606 >seq15740 Length=2267 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || || || | || ||||| || ||| || |||| |||||| || Sbjct 2062 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 2003 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || ||||| || || || ||| | || || ||| Sbjct 2002 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 1943 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || |||| || || || ||||||||||| | | || | |||||||||||| Sbjct 1942 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 1883 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| ||| ||||| | ||| Sbjct 1882 ATCCAGAAGGAGTCGACGCTGCACCTCGTG 1853 >seq7780 Length=1467 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || || || | || ||||| || ||| || |||| |||||| || Sbjct 142 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 201 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || ||||| || || || ||| | || || ||| Sbjct 202 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 261 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || |||| || || || ||||||||||| | | || | |||||||||||| Sbjct 262 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 321 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| ||| ||||| | ||| Sbjct 322 ATCCAGAAGGAGTCGACGCTGCACCTCGTG 351 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || || || | || ||||| || ||| || |||| |||||| || Sbjct 599 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 658 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || ||||| || || || ||| | || || ||| Sbjct 659 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 718 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || |||| || || || ||||||||||| | | || | |||||||||||| Sbjct 719 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 778 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| ||| ||||| | ||| Sbjct 779 ATCCAGAAGGAGTCGACGCTGCACCTCGTG 808 >seq6241 Length=2159 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || || || | || ||||| || ||| || |||| |||||| || Sbjct 1904 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 1845 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || ||||| || || || ||| | || || ||| Sbjct 1844 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 1785 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || |||| || || || ||||||||||| | | || | |||||||||||| Sbjct 1784 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 1725 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| ||| ||||| | ||| Sbjct 1724 ATCCAGAAGGAGTCGACGCTGCACCTCGTG 1695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398792509728571