Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_023581.1 Length=77792 Score E Sequences producing significant alignments: (Bits) Value seq13453 111 8e-20 >seq13453 Length=959 Score = 111 bits (122), Expect = 8e-20 Identities = 222/329 (67%), Gaps = 0/329 (0%) Strand=Plus/Minus Query 37842 TTATTAATGAAATTAAAACTAACCCTACATCACGCCGTCTAATTGTCAATGGATGGAATC 37901 ||||| || |||||| || |||||| | ||| | | || |||||| | |||||| Sbjct 601 TTATTGATCAAATTAGAAATAACCCCAATTCAAGAAGACTTATTGTCTCTTCTTGGAATG 542 Query 37902 CACATGAAGTAGATAAGGCAGCATTGCCACCTTGTCATACATTGTTCCAGTTCTTTGTAG 37961 | ||| | |||| ||||| | || || || | | | || || | | ||| | Sbjct 541 TATCTGATATTAATAAAATGGCATTAGCCCCATGCCACATACTATTTCAAATGTATGTGG 482 Query 37962 AGAATGGAAAACTAAGCTGTCAGTTATATCAACGTAGTGCTGATTTCTTCTTAGGTGTTC 38021 ||| ||||| ||| || | |||||| | || || ||| | |||||||| || | Sbjct 481 CAAATAATAAACTTTCCTGCCAAGTTTATCAAAGAAGCGCCGATGTTTTCTTAGGAGTGC 422 Query 38022 CATTTAATATTGCAAGCTATGCGTTGCTTACACATATCGTAGCTGCAGAATGTGGATTAG 38081 |||||||||| ||||| ||||| || || || ||||| | ||| | |||| ||| Sbjct 421 CATTTAATATAGCAAGTTATGCTTTACTAACTCATATGATTGCTCAACAATGCAACCTAG 362 Query 38082 AAGTTGGTGAATTTGTCTGGACTGGTGGTGTAGTTCACCTGTACAGTAATCACCTTGAGC 38141 |||| ||| || | ||||||||||||| ||| | || | | |||| |||||| Sbjct 361 AAGTATCTGAGTTAATATGGACTGGTGGTGATTGCCACATATATAATGATCATATTGAGC 302 Query 38142 AAGCTAAAAAACAATTAAGTCGTCCACCT 38170 |||| |||| |||| || |||| | ||| Sbjct 301 AAGCAAAAATACAAATATCTCGTTCGCCT 273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248757021788587