Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq13355 152 4e-31 >seq13355 Length=2242 Score = 152 bits (168), Expect = 4e-31 Identities = 149/192 (78%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282336 TATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAA 282395 |||| |||||| | || || |||||||||||||| |||||||| ||||| ||||| | Sbjct 804 TATCTAGACCAAATGCCAATGCAGCAGCAGTTGGCTCATTAATTATTCTTTTTACATTTA 863 Query 282396 GACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAG 282455 ||| |||||| |||| ||||||||||| || |||||||| ||| |||||||| |||| Sbjct 864 AACCTGCAATTTTTCCAGCATCTTTAGTTGCCTGTCTTTGACTATCATTAAAATAAGCAG 923 Query 282456 GAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCA 282515 | || || ||||| ||||| |||||||||| || | ||| | ||||||| |||| Sbjct 924 GCACTGTTATAACAGCATCAGTTACTTCTTCACCCAAGTAATCCTCAGCTGTTTTCTTCA 983 Query 282516 TTTTACTTAAAA 282527 |||| || ||| Sbjct 984 TTTTTTTTTAAA 995 Score = 87.8 bits (96), Expect = 1e-11 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 86114 CTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAAC 86173 ||| ||| |||| | || || |||||||| |||||||||||| | |||| ||||| Sbjct 807 CTAGACCAAATGCCAATGCAGCAGCAGTTGGCTCATTAATTATTCTTTTTACATTTAAAC 866 Query 86174 CCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTA 86233 | |||||||| ||| ||| |||||| ||||| || ||||||||||| || || | Sbjct 867 CTGCAATTTTTCCAGCATCTTTAGTTGCCTGTCTTTGACTATCATTAAAATAAGCAGGCA 926 Query 86234 CAGTAATAACTGC 86246 | || ||||| || Sbjct 927 CTGTTATAACAGC 939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739779128374614