Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq6220 131 2e-25 seq15740 122 8e-23 seq7780 122 8e-23 seq6241 122 8e-23 seq12843 104 2e-17 seq13950 95.1 1e-14 seq10841 95.1 1e-14 >seq6220 Length=1461 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | || || | || ||||||||||| || || || Sbjct 624 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 683 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||||| || |||||||||| |||||| ||||| | Sbjct 684 AATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 743 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||||||||| |||||||| | | ||||| || || || ||||| ||||| Sbjct 744 CTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTTAAAGTCTTCAC 803 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 804 AAAAATCTGCAT 815 >seq15740 Length=2267 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | || || | || ||||||||||| || || || Sbjct 1871 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 1930 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||||| || |||||||||| |||||| ||||| | Sbjct 1931 AATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 1990 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||||||||| |||||||| | | ||||| || || |||| || ||||| Sbjct 1991 CTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCAC 2050 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 2051 GAAGATCTGCAT 2062 Score = 114 bits (126), Expect = 1e-20 Identities = 142/193 (74%), Gaps = 1/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | || || | || ||||||||||| || || || Sbjct 1642 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 1701 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||||| || |||||||||| |||||| ||||| | Sbjct 1702 AATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 1761 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTC-CACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 | | ||||||||||| |||||||| | | ||||| || || |||| || |||| Sbjct 1762 CTCGATCGTGTCGCTCGCCTCCACCTCGGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCA 1821 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 1822 CGAAGATCTGCAT 1834 Score = 98.7 bits (108), Expect = 9e-16 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | || || | || ||||||||||| || || || Sbjct 2099 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 2158 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| || |||||||||| |||||| ||||| | Sbjct 2159 AATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 2218 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTC 35713 | | ||||||||||| |||||||| | | ||||| || || ||| Sbjct 2219 CTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTC 2267 >seq7780 Length=1467 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | || || | || ||||||||||| || || || Sbjct 333 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 274 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||||| || |||||||||| |||||| ||||| | Sbjct 273 AATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 214 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||||||||| |||||||| | | ||||| || || |||| || ||||| Sbjct 213 CTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCAC 154 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 153 GAAGATCTGCAT 142 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | || || | || ||||||||||| || || || Sbjct 790 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 731 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||||| || |||||||||| |||||| ||||| | Sbjct 730 AATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 671 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||||||||| |||||||| | | ||||| || || |||| || ||||| Sbjct 670 CTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCAC 611 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 610 GAAGATCTGCAT 599 Score = 114 bits (126), Expect = 1e-20 Identities = 142/193 (74%), Gaps = 1/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTC-GCTCGTCGTCCAGCTGCTTACCCGCAA 35603 |||||| || |||||||| || || | || | | | || ||||||||||| || || | Sbjct 562 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCCGGCCCTCCTCCAGCTGCTTGCCAGCGA 503 Query 35604 ATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAG 35663 | || | ||||||||||| | ||||| || |||||||||| |||||| ||||| Sbjct 502 AAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGT 443 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 | | | ||||||||||| |||||||| | | ||||| || || |||| || |||| Sbjct 442 TCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCA 383 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 382 CGAAGATCTGCAT 370 >seq6241 Length=2159 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | || || | || ||||||||||| || || || Sbjct 1713 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 1772 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||||| || |||||||||| |||||| ||||| | Sbjct 1773 AATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 1832 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||||||||| |||||||| | | ||||| || || |||| || ||||| Sbjct 1833 CTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCAC 1892 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 1893 GAAGATCTGCAT 1904 Score = 114 bits (126), Expect = 1e-20 Identities = 142/193 (74%), Gaps = 1/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | || || | || ||||||||||| || || || Sbjct 1941 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 2000 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||||| || |||||||||| |||||| ||||| | Sbjct 2001 AATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 2060 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||||||||| |||||||| | | ||||| || || |||| || ||||| Sbjct 2061 CTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCAC 2120 Query 35725 AAATATCT-GCAT 35736 || |||| |||| Sbjct 2121 GAAGATCTAGCAT 2133 >seq12843 Length=905 Score = 104 bits (114), Expect = 2e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| || | || || ||||||||||| || || Sbjct 429 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAA 488 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | | ||||||||| |||||| ||| | | Sbjct 489 GATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 548 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | | ||| || ||||| || | || ||||| Sbjct 549 CTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCAC 608 Query 35725 AAATATCTGCATTCT 35739 || ||||||||||| Sbjct 609 GAAAATCTGCATTCT 623 >seq13950 Length=980 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| || || | ||| || | || || ||||||||||| || || Sbjct 518 CTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAA 459 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | | ||||||||| |||||| ||| | | Sbjct 458 GATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 399 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | | ||| || ||||| || | || ||||| Sbjct 398 CTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCAC 339 Query 35725 AAATATCTGCATTCT 35739 || ||||||||||| Sbjct 338 GAAAATCTGCATTCT 324 >seq10841 Length=1634 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| || || | ||| || | || || ||||||||||| || || Sbjct 410 CTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAA 351 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | | ||||||||| |||||| ||| | | Sbjct 350 GATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 291 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | | ||| || ||||| || | || ||||| Sbjct 290 CTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCAC 231 Query 35725 AAATATCTGCATTCT 35739 || ||||||||||| Sbjct 230 GAAAATCTGCATTCT 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450695896122120