Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_027399.1 Length=346602 Score E Sequences producing significant alignments: (Bits) Value seq8097 122 2e-22 >seq8097 Length=1361 Score = 122 bits (134), Expect = 2e-22 Identities = 274/406 (67%), Gaps = 8/406 (2%) Strand=Plus/Plus Query 48320 ACGTAAAAACAAAAAGAATGCTATTCTTACTGGTGATGCAGGAGTCGGTAAAACTCAGAT 48379 ||||| || ||||| ||| || || | | |||||| |||| || |||||||| || Sbjct 199 ACGTAGAACTAAAAATAATCCTGTTTTAATTGGTGAACCAGGGGTTGGTAAAACCGCAAT 258 Query 48380 CGTCGATGGTTTTGCACAAGCCATTGCTGATGGTGACGTACCTGACTATCTGAAAGGTGT 48439 || || ||||| || ||| || | |||| || || ||||| | | |||||| Sbjct 259 TGTAGAAGGTTTAGCTCAAAGGATAGTAAATGGAGAAGTGCCTGATAACTTAAAAGGTAA 318 Query 48440 TGAGGTATTATCTCTTAACGTTTCTGCTGTAACTGCTGGTACAAAATACCGTGGTGAATT 48499 ||||||||||||| | || || || ||| |||||| | ||||| ||||| ||||| Sbjct 319 AAAGGTATTATCTCTAGATATTGCTTCTTTAATAGCTGGTGCTAAATATCGTGGAGAATT 378 Query 48500 CGAAGAACGTATGGAAGGTATTATTAAAGAACTTAAAAAACGA--GAA--AATGTAATTT 48555 || ||| | | || | || | |||||| ||| | || ||| ||| |||| Sbjct 379 TGAGGAAAGGTTAAAATCTGTTTTGAAAGAA-TTATCCATTGATGGAAATAATAGTATTT 437 Query 48556 TGTTCATTGATGAAGTACATATTATGATGGGTGCTGGTGGTAGCAGCACTGGATCTATGG 48615 | || ||||| ||| | |||| ||| |||||||||||| | | | | || || |||| Sbjct 438 TATTTATTGACGAATTGCATACTATCATGGGTGCTGGT-AAAACTGAA--GGTTCAATGG 494 Query 48616 ATATGAGCAATATCATGAAACCTGCACTTTCACGTGGTGATATTCGTGTTATCGGTGCAA 48675 || | ||||| |||| ||||| | || | ||||| | | | ||| || |||| Sbjct 495 ATGCAGGTAATATGTTGAAGCCTGCTTTAGCAAGAGGTGAATTACATTGTATTGGAGCAA 554 Query 48676 CAACTTATGAGGAATATCGCCAGAACATTGAAAAAGATGCTGCATT 48721 | || | || || ||| | | | || |||||||||||||| || Sbjct 555 CTACATTAGACGAGTATAGGAAATATATAGAAAAAGATGCTGCTTT 600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108748830131661