Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq6220 93.3 3e-14 seq12843 82.4 5e-11 >seq6220 Length=1461 Score = 93.3 bits (102), Expect = 3e-14 Identities = 142/197 (72%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| || ||||| || || | || || || | || || || || || || || || Sbjct 624 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 683 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || | ||||| ||||| || || | ||||||||||| |||||| | || ||| Sbjct 684 AATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTC-GCCTTCACGT 742 Query 34635 TAAA-ATTGTGTCT-TCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTC 34692 | || ||||| |||| |||||| || | || ||||| || |||||||| || ||| Sbjct 743 TCTCGATCGTGTCGCTCGC-CTCCACCTCGAGGGCAATCGTCTTGCCGGTTAAAGTCTTC 801 Query 34693 ACAAAAATCTGCATGTT 34709 ||||||||||||||||| Sbjct 802 ACAAAAATCTGCATGTT 818 >seq12843 Length=905 Score = 82.4 bits (90), Expect = 5e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||| |||||| || ||||| || || | || || || | || || || || Sbjct 418 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTCGAGCTGC 477 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 ||||| || || || | |||||| |||||||| || | || |||||||| |||||| Sbjct 478 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTG 537 Query 34624 TGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | || ||||| | ||| || || | || || || |||||||| Sbjct 538 -GCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGT 596 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 | || ||||| ||||||||||| Sbjct 597 GAGGGTCTTCACGAAAATCTGCAT 620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314663091635987