Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq6220 96.9 3e-15 seq15740 95.1 1e-14 seq7780 95.1 1e-14 seq6241 95.1 1e-14 >seq6220 Length=1461 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || ||| | ||||||||| | ||| | || || ||||| || Sbjct 816 CATGCAGATTTTTGTGAAGACTTTAACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAG 757 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| |||| |||| || || || || || ||||| || ||||| || || || || Sbjct 756 CGACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCA 697 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| | || | ||| ||||| || |||| || | || | | || ||||| Sbjct 696 GCAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAA 637 Query 27167 CATTCAAAAGGAGTCGAC 27184 ||| || ||||||||||| Sbjct 636 CATCCAGAAGGAGTCGAC 619 >seq15740 Length=2267 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | ||| | || || ||||| || | Sbjct 2062 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 2003 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| || || || || || ||||| || ||||| || || || || Sbjct 2002 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 1943 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| ||||| || |||| || | || | | || |||||| Sbjct 1942 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 1883 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 1882 ATCCAGAAGGAGTCGAC 1866 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/198 (70%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCT-TGAAGTGGAACCGTC 27046 |||||||| || || || || |||||||||||| | ||| | || || ||||| || Sbjct 1834 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCCGAGGTGGAGGCGAG 1775 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| |||| |||| || || || || || ||||| || ||||| || || || || Sbjct 1774 CGACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCA 1715 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| | || | ||| ||||| || |||| || | || | | || ||||| Sbjct 1714 GCAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAA 1655 Query 27167 CATTCAAAAGGAGTCGAC 27184 ||| || ||||||||||| Sbjct 1654 CATCCAGAAGGAGTCGAC 1637 >seq7780 Length=1467 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | ||| | || || ||||| || | Sbjct 142 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 201 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| || || || || || ||||| || ||||| || || || || Sbjct 202 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 261 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| ||||| || |||| || | || | | || |||||| Sbjct 262 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 321 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 322 ATCCAGAAGGAGTCGAC 338 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | ||| | || || ||||| || | Sbjct 599 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 658 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| || || || || || ||||| || ||||| || || || || Sbjct 659 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 718 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| ||||| || |||| || | || | | || |||||| Sbjct 719 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 778 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 779 ATCCAGAAGGAGTCGAC 795 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/198 (71%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | ||| | || || ||||| || | Sbjct 370 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 429 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| || || || || || ||||| || ||||| || || || || Sbjct 430 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 489 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCG-ACCGTTTCCGATTACAA 27166 ||||| | || | ||| ||||| || |||| || | | || | | || ||||| Sbjct 490 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGGCACGCTCGCGGACTACAA 549 Query 27167 CATTCAAAAGGAGTCGAC 27184 ||| || ||||||||||| Sbjct 550 CATCCAGAAGGAGTCGAC 567 >seq6241 Length=2159 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | ||| | || || ||||| || | Sbjct 1904 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 1845 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| || || || || || ||||| || ||||| || || || || Sbjct 1844 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 1785 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| ||||| || |||| || | || | | || |||||| Sbjct 1784 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 1725 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 1724 ATCCAGAAGGAGTCGAC 1708 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/198 (71%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 26988 ATGC-AGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||| |||| || || || || |||||||||||| | ||| | || || ||||| || Sbjct 2133 ATGCTAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAG 2074 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| |||| |||| || || || || || ||||| || ||||| || || || || Sbjct 2073 CGACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCA 2014 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||| ||||| || |||| || | || | | || ||||| Sbjct 2013 GCAGCGTCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAA 1954 Query 27167 CATTCAAAAGGAGTCGAC 27184 ||| || ||||||||||| Sbjct 1953 CATCCAGAAGGAGTCGAC 1936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434824136873280