Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq13453 109 4e-19 >seq13453 Length=959 Score = 109 bits (120), Expect = 4e-19 Identities = 186/268 (69%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 126141 CATTCTTTTGCAACAAGATGTGTCAGTAAAGCATAACTTGCAATATTGAAAGGAACACCT 126200 |||| || |||| | ||| || ||||||||||||||||| ||||| || || || ||| Sbjct 370 CATTGTTGAGCAATCATATGAGTTAGTAAAGCATAACTTGCTATATTAAATGGCACTCCT 429 Query 126201 AAAAATATATCAGCACTTCTTTGATATAATTGACAATTTAATTTACCCTCTTGTACGTAA 126260 || || | ||| || ||||||||||| | ||| || | |||| | | || || Sbjct 430 AAGAAAACATCGGCGCTTCTTTGATAAACTTGGCAGGAAAGTTTATTATTTGCCACATAC 489 Query 126261 AATTGAAACATTGTGTGGCAAGGTGGTAATGCCATTGAATCGATTTCAGTAGGATTCCAT 126320 | |||||| | | ||||||| || | |||||||||| || || |||| |||||| Sbjct 490 ATTTGAAATAGTATGTGGCATGGGGCTAATGCCATTTTATTAATATCAGATACATTCCAA 549 Query 126321 GCTGAAACAATGTGACGTCGAGAGTTTGGATTGGTTTTAATTTGTTGTATAACTGATT-- 126378 | || ||||| | | || || || || || || ||||||| | |||| |||| Sbjct 550 GAAGAGACAATAAGTCTTCTTGAATTGGGGTTATTTCTAATTTGATCAATAA--GATTAC 607 Query 126379 TTAATTGATCGTAATGATTTCCATTTTT 126406 ||| ||| || ||| | |||||| || Sbjct 608 TTATTTGGTCTATATGCTCTCCATTGTT 635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408512055369173