Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq13981 107 2e-18 seq15072 102 7e-17 seq16268 98.7 9e-16 >seq13981 Length=1966 Score = 107 bits (118), Expect = 2e-18 Identities = 295/444 (66%), Gaps = 21/444 (5%) Strand=Plus/Plus Query 6529 CAGCTGGATCC---GGAGCCGCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGT 6585 |||||| ||| ||||| ||| | ||| || ||||| || || ||||| | || Sbjct 180 CAGCTGCGTCCCTGGGAGCGCCTCCACGTGATTGCTGTAGACGTGGGCGTCCCCGAGGGT 239 Query 6586 ATGCACCAGCTCCCCAGGAACCAACCCCACGACATGAGCGATCATGTA-CGTGAGCAGAG 6644 || ||||||||||| || |||||| | | || |||| ||| ||| ||||| | Sbjct 240 GTGTACCAGCTCCCCTGGCTTCAACCCAGTGCTCTTGGCAATCA-GTATCGTCAGCAGGG 298 Query 6645 CGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCT 6704 |||| || |||||||| ||||| ||||| | |||||| || | |||||||||||| Sbjct 299 CGTAGCTGGCAATGTTAAACGGTACCCCCAGCCCCATATCGCAGCTCCGTTGATAGAGCA 358 Query 6705 GGCAGGACAGCTC---CCCATTCGCG---ACGTAGAATTG-GCAGAGGGTGTGGCACGGG 6757 |||||||||||| | || | | ||||||||||| || | | ||||| || Sbjct 359 TGCAGGACAGCTCCTGCGTGTTGGTGTTCACGTAGAATTGAGCCAACAG-ATGGCATGGT 417 Query 6758 GGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCA 6817 ||||| |||||| | | || | ||||||||||| | || | | |||||| Sbjct 418 GGGAGGGCCATCTCATGCAGCGCGGAGGGGTTCCACGCCGTAAACAGCAATCGTCTGTCG 477 Query 6818 TCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAA 6877 | ||||| ||| | ||| || | | | || | || || | |||| ||| Sbjct 478 TTGGGGTTTGTCTTGAGGGTTTCCACAATTTGCTTTATTTGATCGACCCCCTTTCCGTCG 537 Query 6878 TAGTCCGCTTCGCTCCCCCGA----TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTA 6933 |||| || || || |||| || |||||||||| |||||| |||||||| Sbjct 538 TAGT----TTTCCTTGAAGGAGGTGTACTTTGCACCAAAGTGTCGCCACTGAAACCCGTA 593 Query 6934 GACCGGGCCCAAGTCGCCCTCCTC 6957 |||||||| | ||| |||||| Sbjct 594 CACCGGGCCAAGGTCCATCTCCTC 617 Score = 107 bits (118), Expect = 2e-18 Identities = 295/444 (66%), Gaps = 21/444 (5%) Strand=Plus/Minus Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA- 34446 |||||| ||| | |||||||| |||||||| |||||| |||||||||| || |||| Sbjct 617 GAGGAGATGGACCTTGGCCCGGTGTACGGGTTTCAGTGGCGACACTTTGGTGCAAAGTAC 558 Query 34447 ---TCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGAT 34503 || || || |||| ||| |||| | || || | || | | | Sbjct 557 ACCTCCTTCAAGGAAA----ACTACGACGGAAAGGGGGTCGATCAAATAAAGCAAATTGT 502 Query 34504 CGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAA 34563 || ||| | ||| ||||| | |||||| | | || | ||||||||||| Sbjct 501 GGAAACCCTCAAGACAAACCCCAACGACAGACGATTGCTGTTTACGGCGTGGAACCCCTC 442 Query 34564 GGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGT---CG 34619 | || | | |||||| ||||| || ||||| | | || ||||||||||| | Sbjct 441 CGCGCTGCATGAGATGGCCCTCCCACCATGCCAT-CTGTTGGCTCAATTCTACGTGAACA 383 Query 34620 CGAATGGG---GAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGG 34676 | || | |||||||||||| |||||||||||| | || |||||| | |||| Sbjct 382 CCAACACGCAGGAGCTGTCCTGCATGCTCTATCAACGGAGCTGCGATATGGGGCTGGGGG 323 Query 34677 TGCCGTTCAACATTGCTAGTTACGCTCTGCTCACG-TACATGATCGCTCATGTCGTGGGG 34735 | ||||| |||||||| || ||||| ||||| ||| ||| |||| || | | ||| Sbjct 322 TACCGTTTAACATTGCCAGCTACGCCCTGCTGACGATAC-TGATTGCCAAGAGCACTGGG 264 Query 34736 TTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACATC 34795 ||| || ||||||||||| || || | ||||| || || ||||| || ||| | Sbjct 263 TTGAAGCCAGGGGAGCTGGTACACACCCTCGGGGACGCCCACGTCTACAGCAATCACGTG 204 Query 34796 GAGCGGCTCC---GGATCCAGCTG 34816 ||| ||||| ||| |||||| Sbjct 203 GAGGCGCTCCCAGGGACGCAGCTG 180 >seq15072 Length=876 Score = 102 bits (112), Expect = 7e-17 Identities = 292/441 (66%), Gaps = 20/441 (5%) Strand=Plus/Plus Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA- 34446 |||||| ||| | |||||||| |||||||| |||||| |||||||||| || |||| Sbjct 22 GAGGAGATGGACCTTGGCCCGGTGTACGGGTTTCAGTGGCGACACTTTGGTGCAAAGTAC 81 Query 34447 ---TCGGGGGAGCGAAGCGGACTATTCGG-GACAGGGAGCGGACCAGCTGCAGTACGTGA 34502 || || || |||| || || |||| || | || | || | | Sbjct 82 ACCTCCTTCAAGGAAA----ACTA--CGACGAAAGGGGTCG-ATCAAATAAAGCAAATTG 134 Query 34503 TCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGA 34562 | || ||| | ||| ||||| | |||||| | | || | ||||||||||| Sbjct 135 TGGAAACCCTCAAGACAAACCCCAACGACAGACGATTGCTGTTTACGGCGTGGAACCCCT 194 Query 34563 AGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT---CG 34619 | || | | |||||| ||||| || ||||| || ||||||||||| | Sbjct 195 CCGCGCTGCATGAGATGGCCCTCCCACCATGCCATCTGCTGGCTCAATTCTACGTGAACA 254 Query 34620 CGAATGGG---GAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGG 34676 | || | |||||||||||| |||||||||||| | || |||||| | |||| Sbjct 255 CCAACACGCAGGAGCTGTCCTGCATGCTCTATCAACGGAGCTGCGATATGGGGCTGGGGG 314 Query 34677 TGCCGTTCAACATTGCTAGTTACGCTCTGCTCACG-TACATGATCGCTCATGTCGTGGGG 34735 | ||||| |||||||| || ||||| ||||| ||| ||| |||| || | | ||| Sbjct 315 TACCGTTTAACATTGCCAGCTACGCCCTGCTGACGATAC-TGATTGCCAAGAGCACTGGG 373 Query 34736 TTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACATC 34795 ||| || ||||||||||| || || | ||||| || || ||||| || ||| | Sbjct 374 TTGAAGCCAGGGGAGCTGGTACACACCCTCGGGGACGCCCACGTCTACAGCAATCACGTG 433 Query 34796 GAGCGGCTCCGGATCCAGCTG 34816 ||| ||||| | |||||| Sbjct 434 GAGGCGCTCCAGGAGCAGCTG 454 Score = 102 bits (112), Expect = 7e-17 Identities = 292/441 (66%), Gaps = 20/441 (5%) Strand=Plus/Minus Query 6529 CAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATG 6588 |||||| | ||||| ||| | ||| || ||||| || || ||||| | || || Sbjct 454 CAGCTGCTCCTGGAGCGCCTCCACGTGATTGCTGTAGACGTGGGCGTCCCCGAGGGTGTG 395 Query 6589 CACCAGCTCCCCAGGAACCAACCCCACGACATGAGCGATCATGTA-CGTGAGCAGAGCGT 6647 ||||||||||| || |||||| | | || |||| ||| ||| ||||| |||| Sbjct 394 TACCAGCTCCCCTGGCTTCAACCCAGTGCTCTTGGCAATCA-GTATCGTCAGCAGGGCGT 336 Query 6648 AACTAGCAATGTTGAACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGC 6707 | || |||||||| ||||| ||||| | |||||| || | |||||||||||| || Sbjct 335 AGCTGGCAATGTTAAACGGTACCCCCAGCCCCATATCGCAGCTCCGTTGATAGAGCATGC 276 Query 6708 AGGACAGCTC---CCCATTCGCG---ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGA 6761 |||||||||| | || | | ||||||||||| || ||||| || |||| Sbjct 275 AGGACAGCTCCTGCGTGTTGGTGTTCACGTAGAATTGAGCCAGCAGATGGCATGGTGGGA 216 Query 6762 GCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAG 6821 | |||||| | | || | ||||||||||| | || | | |||||| | | Sbjct 215 GGGCCATCTCATGCAGCGCGGAGGGGTTCCACGCCGTAAACAGCAATCGTCTGTCGTTGG 156 Query 6822 GGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTCCCTGTC-CCGAATAG 6880 |||| ||| | ||| || | | | || | || | || |||| || || ||| Sbjct 155 GGTTTGTCTTGAGGGTTTCCACAATTTGCTTTATTTGAT-CGACCCCTTTCGTCG--TAG 99 Query 6881 TCCGCTTCGCTCCCCCGA----TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGAC 6936 | || || || |||| || |||||||||| |||||| |||||||| || Sbjct 98 T----TTTCCTTGAAGGAGGTGTACTTTGCACCAAAGTGTCGCCACTGAAACCCGTACAC 43 Query 6937 CGGGCCCAAGTCGCCCTCCTC 6957 |||||| | ||| |||||| Sbjct 42 CGGGCCAAGGTCCATCTCCTC 22 >seq16268 Length=2759 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 34627 GGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAA 34686 ||||||||||||| |||||||||||| | || |||||| | ||||| ||||| || Sbjct 298 GGAGCTGTCCTGCATGCTCTATCAACGGAGCTGCGATATGGGGCTGGGGGTACCGTTTAA 357 Query 34687 CATTGCTAGTTACGCTCTGCTCACG-TACATGATCGCTCATGTCGTGGGGTTGGTTCCTG 34745 |||||| || ||||| ||||| ||| ||| |||| || | | |||||| || | Sbjct 358 CATTGCCAGCTACGCCCTGCTGACGATAC-TGATTGCCAAGAGCACTGGGTTGAAGCCAG 416 Query 34746 GGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCC 34805 |||||||||| || || | ||||| || || ||||| || ||| | ||| ||||| Sbjct 417 GGGAGCTGGTACACACCCTCGGGGACGCCCACGTCTACAGCAATCACGTGGAGGCGCTCC 476 Query 34806 GGATCCAGCTG 34816 | |||||| Sbjct 477 AGGAGCAGCTG 487 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 6529 CAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATG 6588 |||||| | ||||| ||| | ||| || ||||| || || ||||| | || || Sbjct 487 CAGCTGCTCCTGGAGCGCCTCCACGTGATTGCTGTAGACGTGGGCGTCCCCGAGGGTGTG 428 Query 6589 CACCAGCTCCCCAGGAACCAACCCCACGACATGAGCGATCATGTA-CGTGAGCAGAGCGT 6647 ||||||||||| || |||||| | | || |||| ||| ||| ||||| |||| Sbjct 427 TACCAGCTCCCCTGGCTTCAACCCAGTGCTCTTGGCAATCA-GTATCGTCAGCAGGGCGT 369 Query 6648 AACTAGCAATGTTGAACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGC 6707 | || |||||||| ||||| ||||| | |||||| || | |||||||||||| || Sbjct 368 AGCTGGCAATGTTAAACGGTACCCCCAGCCCCATATCGCAGCTCCGTTGATAGAGCATGC 309 Query 6708 AGGACAGCTCC 6718 ||||||||||| Sbjct 308 AGGACAGCTCC 298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448165244728080