Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq13950 91.5 1e-13 seq12843 91.5 1e-13 seq10841 91.5 1e-13 >seq13950 Length=980 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| || |||||||| || || || ||| | ||||| || || ||| Sbjct 326 AATGCAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGCCAG 385 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || || || ||||| |||||| | || || || || Sbjct 386 CGACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCA 445 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || || || || || || || || | ||||| | | || ||||| Sbjct 446 GCAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGAGGGCCGCACCCTCGCGGACTACAA 505 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || ||||||||||| Sbjct 506 CATCCAGAAAGAGTCCAC 523 >seq12843 Length=905 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| || |||||||| || || || ||| | ||||| || || ||| Sbjct 621 AATGCAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGCCAG 562 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || || || ||||| |||||| | || || || || Sbjct 561 CGACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCA 502 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || || || || || || || || | ||||| | | ||| ||||| Sbjct 501 GCAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGAGGGCCGCACCCTCGCCGACTACAA 442 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 441 CATCCAGAAGGAGTCCAC 424 >seq10841 Length=1634 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| || |||||||| || || || ||| | ||||| || || ||| Sbjct 218 AATGCAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGCCAG 277 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || || || ||||| |||||| | || || || || Sbjct 278 CGACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCA 337 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || || || || || || || || | ||||| | | || ||||| Sbjct 338 GCAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGAGGGCCGCACCCTCGCGGACTACAA 397 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || ||||||||||| Sbjct 398 CATCCAGAAAGAGTCCAC 415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337938172128212