Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_031230.1 Length=98136 Score E Sequences producing significant alignments: (Bits) Value seq16281 82.4 5e-11 seq6626 82.4 5e-11 seq5209 82.4 5e-11 >seq16281 Length=2264 Score = 82.4 bits (90), Expect = 5e-11 Identities = 100/135 (74%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 46322 CCCACGTTGCGCTGATGCCAGATGCTCACGCAGGCAAGGGGTCTGCCGTGGGCACGGTGA 46381 |||| ||||| | |||||||| | |||| ||| ||||| | ||||| ||||||| Sbjct 656 CCCA-GTTGCCATCATGCCAGACGTGCACGGCGGCGTGGGGTGCACAGTGGGGACGGTGA 714 Query 46382 TCCCCACCAAGGACGCCGTCATCCCAGCGGCCGTGGGTGTCGACATCGGTTGCGGGATGA 46441 ||||||||| | ||| ||||||||||| ||||| || ||||| || || || |||| Sbjct 715 TCCCCACCAGCGGGGCCCTCATCCCAGCGAGTGTGGGGGTGGACATTGGGTGTGGCATGA 774 Query 46442 TCGGCGTGGAGACCT 46456 | | || |||||| Sbjct 775 TAGCGGTAAAGACCT 789 >seq6626 Length=1519 Score = 82.4 bits (90), Expect = 5e-11 Identities = 100/135 (74%), Gaps = 1/135 (1%) Strand=Plus/Minus Query 46322 CCCACGTTGCGCTGATGCCAGATGCTCACGCAGGCAAGGGGTCTGCCGTGGGCACGGTGA 46381 |||| ||||| | |||||||| | |||| ||| ||||| | ||||| ||||||| Sbjct 1281 CCCA-GTTGCCATCATGCCAGACGTGCACGGCGGCGTGGGGTGCACAGTGGGGACGGTGA 1223 Query 46382 TCCCCACCAAGGACGCCGTCATCCCAGCGGCCGTGGGTGTCGACATCGGTTGCGGGATGA 46441 ||||||||| | ||| ||||||||||| ||||| || ||||| || || || |||| Sbjct 1222 TCCCCACCAGCGGGGCCCTCATCCCAGCGAGTGTGGGGGTGGACATTGGGTGTGGCATGA 1163 Query 46442 TCGGCGTGGAGACCT 46456 | | || |||||| Sbjct 1162 TAGCGGTAAAGACCT 1148 >seq5209 Length=1223 Score = 82.4 bits (90), Expect = 5e-11 Identities = 100/135 (74%), Gaps = 1/135 (1%) Strand=Plus/Minus Query 46322 CCCACGTTGCGCTGATGCCAGATGCTCACGCAGGCAAGGGGTCTGCCGTGGGCACGGTGA 46381 |||| ||||| | |||||||| | |||| ||| ||||| | ||||| ||||||| Sbjct 1188 CCCA-GTTGCCATCATGCCAGACGTGCACGGCGGCGTGGGGTGCACAGTGGGGACGGTGA 1130 Query 46382 TCCCCACCAAGGACGCCGTCATCCCAGCGGCCGTGGGTGTCGACATCGGTTGCGGGATGA 46441 ||||||||| | ||| ||||||||||| ||||| || ||||| || || || |||| Sbjct 1129 TCCCCACCAGCGGGGCCCTCATCCCAGCGAGTGTGGGGGTGGACATTGGGTGTGGCATGA 1070 Query 46442 TCGGCGTGGAGACCT 46456 | | || |||||| Sbjct 1069 TAGCGGTAAAGACCT 1055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313844064748563