Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_031280.1 Length=104906 Score E Sequences producing significant alignments: (Bits) Value seq13453 87.8 1e-12 >seq13453 Length=959 Score = 87.8 bits (96), Expect = 1e-12 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 70382 CCATGTCATACACTATTCCAATTCTTTGTGGAAGATGGTAAGCTTTCTTGCCAGCTATAT 70441 ||||| || | |||||| ||| | | ||||| | || ||| ||||| ||||| | ||| Sbjct 512 CCATGCCACATACTATTTCAAATGTATGTGGCAAATAATAAACTTTCCTGCCAAGTTTAT 453 Query 70442 CAACGTAGTGCTGACATTTTACTTGGTGTGCCATTCAATATTGCATCATATGCCTTACTT 70501 ||| | || || || |||| | || |||||||| ||||| ||| ||||| ||||| Sbjct 452 CAAAGAAGCGCCGATGTTTTCTTAGGAGTGCCATTTAATATAGCAAGTTATGCTTTACTA 393 Query 70502 ACACATCTTATTGCTGCTGAGTGTGGGTTAGGTGTTGGTGAGTTTGTTTGGACTGGTGGT 70561 || ||| | |||||| | || ||| || |||||| | |||||||||||| Sbjct 392 ACTCATATGATTGCTCAACAATGCAACCTAGAAGTATCTGAGTTAATATGGACTGGTGGT 333 Query 70562 GAT 70564 ||| Sbjct 332 GAT 330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335503486732393