Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq12843 134 1e-26 seq7780 134 1e-26 seq15740 132 3e-26 seq6241 132 3e-26 seq13950 125 5e-24 seq10841 125 5e-24 seq6220 120 2e-22 seq10875 89.7 4e-13 >seq12843 Length=905 Score = 134 bits (148), Expect = 1e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || ||| |||||| ||||||||||| |||||||| ||| | || || Sbjct 411 CACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTC 470 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || ||||| | ||||||||| || | || | ||||||||| ||| Sbjct 471 GAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTG 530 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| || | | |||| | ||||||||| || || ||||| | | || |||| Sbjct 531 GATCTT-GGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCT 589 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||||||||||||||| || ||||| Sbjct 590 TACCGGTGAGGGTCTTCACGAAAATCTGCAT 620 >seq7780 Length=1467 Score = 134 bits (148), Expect = 1e-26 Identities = 171/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 44106 TCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAAT 44165 |||| || || | ||| | | ||| ||||| ||||| |||||| ||||||||||| | Sbjct 830 TCATACCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGT 771 Query 44166 CGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | ||||| ||| | || ||||||||||| || || || || | |||||||| || | Sbjct 770 CCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAG 711 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGAT 44284 ||| | || ||||| ||| |||||| ||||| |||| | || |||||| | Sbjct 710 GAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCAC-GTTCTCGATCGTGTCGCTCGCC 652 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| | | ||||||||| || || || |||||||||||||| ||||| Sbjct 651 TCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 599 Score = 132 bits (146), Expect = 3e-26 Identities = 170/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||| ||||| ||||| |||||| ||||||||||| || Sbjct 372 CATACCGCCGCGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC 313 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||||| ||| | || ||||||||||| || || || || | |||||||| || | Sbjct 312 CGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGG 253 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 ||| | || ||||| ||| |||||| ||||| |||| | || |||||| | | Sbjct 252 AGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCAC-GTTCTCGATCGTGTCGCTCGCCT 194 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| | | ||||||||| || || || |||||||||||||| ||||| Sbjct 193 CCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 142 Score = 131 bits (144), Expect = 1e-25 Identities = 171/233 (73%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||| ||||| ||||| |||||| ||||||||||| || Sbjct 601 CATACCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC 542 Query 44167 GGCGAGT-TGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 ||||| || || | || ||||||||||| || || || || | |||||||| || | Sbjct 541 CGCGAGCGTGCCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAG 482 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGAT 44284 ||| | || ||||| ||| |||||| ||||| |||| | || |||||| | Sbjct 481 GAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCAC-GTTCTCGATCGTGTCGCTCGCC 423 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| | | ||||||||| || || || |||||||||||||| ||||| Sbjct 422 TCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 370 >seq15740 Length=2267 Score = 132 bits (146), Expect = 3e-26 Identities = 170/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||| ||||| ||||| |||||| ||||||||||| || Sbjct 1832 CATACCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC 1891 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||||| ||| | || ||||||||||| || || || || | |||||||| || | Sbjct 1892 CGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGG 1951 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 ||| | || ||||| ||| |||||| |||| | |||| | || |||||| | | Sbjct 1952 AGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTCTCGATCGTGTCGCTCGCCT 2010 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| | | ||||||||| || || || |||||||||||||| ||||| Sbjct 2011 CCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 2062 Score = 127 bits (140), Expect = 1e-24 Identities = 171/234 (73%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 44106 TCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAAT 44165 |||| || || | ||| | | ||| ||||| ||||| |||||| ||||||||||| | Sbjct 1602 TCATACCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGT 1661 Query 44166 CGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | ||||| ||| | || ||||||||||| || || || || | |||||||| || | Sbjct 1662 CCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAG 1721 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGAT 44284 ||| | || ||||| ||| |||||| |||| | |||| | || |||||| | Sbjct 1722 GAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTCTCGATCGTGTCGCTCGCC 1780 Query 44285 TCCACCTC-CACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| | | ||||||||| || || || |||||||||||||| ||||| Sbjct 1781 TCCACCTCGGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 1834 Score = 98.7 bits (108), Expect = 7e-16 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||| ||||| ||||| |||||| ||||||||||| || Sbjct 2060 CATACCGCCGCGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC 2119 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||||| ||| | || ||||||||||| || || || || | |||||||| || | Sbjct 2120 CGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGG 2179 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| ||| |||||| |||| | |||| | || |||||| | | Sbjct 2180 GGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTCTCGATCGTGTCGCTCGCCT 2238 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGT 44313 ||||||| | | ||||||||| || || Sbjct 2239 CCACCTCGAGGGCAATCGTCTTGCCGGT 2266 >seq6241 Length=2159 Score = 132 bits (146), Expect = 3e-26 Identities = 170/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||| ||||| ||||| |||||| ||||||||||| || Sbjct 1674 CATACCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC 1733 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||||| ||| | || ||||||||||| || || || || | |||||||| || | Sbjct 1734 CGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGG 1793 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 ||| | || ||||| ||| |||||| |||| | |||| | || |||||| | | Sbjct 1794 AGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTCTCGATCGTGTCGCTCGCCT 1852 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| | | ||||||||| || || || |||||||||||||| ||||| Sbjct 1853 CCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 1904 Score = 131 bits (144), Expect = 1e-25 Identities = 166/226 (73%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||| ||||| ||||| |||||| ||||||||||| || Sbjct 1902 CATACCGCCGCGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC 1961 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||||| ||| | || ||||||||||| || || || || | ||||||||| || | Sbjct 1962 CGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGG 2021 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 ||| | || ||||| ||| |||||| |||| | |||| | || |||||| | | Sbjct 2022 AGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTCTCGATCGTGTCGCTCGCCT 2080 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGAT 44331 ||||||| | | ||||||||| || || || |||||||||||||| Sbjct 2081 CCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGAT 2126 >seq13950 Length=980 Score = 125 bits (138), Expect = 5e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || ||| ||| || ||||||||||| || ||||| ||| | || || Sbjct 536 CACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTC 477 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || ||||| | ||||||||| || | || | ||||||||| ||| Sbjct 476 GAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTG 417 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | |||| | ||||||||| || || ||||| | | || |||| Sbjct 416 GATCTTGGCCTTGAC-GTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCT 358 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||||||||||||||| || ||||| Sbjct 357 TACCGGTGAGGGTCTTCACGAAAATCTGCAT 327 >seq10841 Length=1634 Score = 125 bits (138), Expect = 5e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || ||| ||| || ||||||||||| || ||||| ||| | || || Sbjct 428 CACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTC 369 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || ||||| | ||||||||| || | || | ||||||||| ||| Sbjct 368 GAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTG 309 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | |||| | ||||||||| || || ||||| | | || |||| Sbjct 308 GATCTTGGCCTTGAC-GTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCT 250 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||||||||||||||| || ||||| Sbjct 249 TACCGGTGAGGGTCTTCACGAAAATCTGCAT 219 >seq6220 Length=1461 Score = 120 bits (132), Expect = 2e-22 Identities = 168/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||| ||||| ||||| |||||| ||||||||||| || Sbjct 585 CATACCGCCGCGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC 644 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||||| ||| | || ||||||||||| || || || || | |||||||| || | Sbjct 645 CGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGG 704 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 ||| | || ||||| ||| |||||| |||| | |||| | || |||||| | | Sbjct 705 AGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTCTCGATCGTGTCGCTCGCCT 763 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||| | | ||||||||| || || | |||||||| || || |||||| Sbjct 764 CCACCTCGAGGGCAATCGTCTTGCCGGTTAAAGTCTTCACAAAAATCTGCATG 816 Score = 95.1 bits (104), Expect = 9e-15 Identities = 152/213 (71%), Gaps = 7/213 (3%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| ||||| |||||| ||||||||||| || ||||| ||| | || || Sbjct 163 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTC 222 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCT--GCTGATCTGAAGGCACACCTTCCTTTTCC 44245 ||||||||| || || || || | || | |||| || | | || | ||| | || Sbjct 223 CAGCTGCTTGCCAGCGAAAATGAGCCGNTCCGCTGGTC-GCGTGGACTGCCTCC--TGCC 279 Query 44246 GTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 |||||| |||| | |||| | || |||||| | |||||||| | | |||||| Sbjct 280 TGGATCTTCGCCTTC-ACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGT 338 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || || |||||||||||||| ||||| Sbjct 339 CTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 371 >seq10875 Length=435 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || ||| |||||| ||||||||||| || ||||| ||| | || || Sbjct 297 CACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTC 356 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| || || || || | ||||||||| || | || | ||| ||||| ||| Sbjct 357 CAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTG 416 Query 44248 TATCTTCTGCTTCA 44261 |||||| ||||| Sbjct 417 GATCTTCGCCTTCA 430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359914327166163