Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq13950 159 8e-34 seq12843 159 8e-34 seq10841 159 8e-34 seq15740 125 2e-23 seq7780 125 2e-23 seq6241 125 2e-23 seq6220 125 2e-23 >seq13950 Length=980 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || ||||| || || || ||| |||||||||| || | ||| Sbjct 330 CAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGCCAGCGAC 389 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||||||||| ||||| |||||||| ||||| ||||| ||||||||||| Sbjct 390 ACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCAGCAG 449 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || |||||||| || || | || || || || || ||| || Sbjct 450 CGTCTCATCTTCGCTGGTAAGCAGCTCGAGGAGGGCCGCACCCTCGCGGACTACAACATC 509 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || ||||| || || || || || || Sbjct 510 CAGAAAGAGTCCACCCTCCACCTCGT 535 >seq12843 Length=905 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || ||||| || || || ||| |||||||||| || | ||| Sbjct 617 CAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGCCAGCGAC 558 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||||||||| ||||| |||||||| ||||| ||||| ||||||||||| Sbjct 557 ACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCAGCAG 498 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || |||||||| || || | || || ||||| || ||| || Sbjct 497 CGTCTCATCTTCGCTGGTAAGCAGCTCGAGGAGGGCCGCACCCTCGCCGACTACAACATC 438 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 437 CAGAAGGAGTCCACCCTCCACCTCGT 412 >seq10841 Length=1634 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || ||||| || || || ||| |||||||||| || | ||| Sbjct 222 CAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGCCAGCGAC 281 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||||||||| ||||| |||||||| ||||| ||||| ||||||||||| Sbjct 282 ACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCAGCAG 341 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || |||||||| || || | || || || || || ||| || Sbjct 342 CGTCTCATCTTCGCTGGTAAGCAGCTCGAGGAGGGCCGCACCCTCGCGGACTACAACATC 401 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || ||||| || || || || || || Sbjct 402 CAGAAAGAGTCCACCCTCCACCTCGT 427 >seq15740 Length=2267 Score = 125 bits (138), Expect = 2e-23 Identities = 154/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || |||||||| || || || || || ||||| ||||||||||||| ||| Sbjct 2059 CAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC--- 2003 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||||||||| || ||||| |||||||| || || || ||||| |||||| Sbjct 2002 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 1943 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || || ||||| || || ||||| || || || | || || || || || ||| Sbjct 1942 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 1883 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || ||||| || || Sbjct 1882 ATCCAGAAGGAGTCGACGCTGCACCTCGT 1854 Score = 120 bits (132), Expect = 7e-22 Identities = 154/210 (73%), Gaps = 7/210 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTC-GAGGTGGAA---AGCTC 177979 || || |||||||| || || || || || ||||| ||||| |||||||| ||| Sbjct 1831 CAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCCGAGGTGGAGGCGAGC-- 1774 Query 177980 AGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCA 178039 ||||| ||||||||||| || ||||| |||||||| || || || ||||| ||||| Sbjct 1773 -GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCA 1715 Query 178040 GCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAA 178099 ||| || || || ||||| || || ||||| || || || | || || || || || || Sbjct 1714 GCAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAA 1655 Query 178100 CGTCCAAAAAGAATCAACACTGCATCTTGT 178129 | |||| || || || || ||||| || || Sbjct 1654 CATCCAGAAGGAGTCGACGCTGCACCTCGT 1625 Score = 105 bits (116), Expect = 2e-17 Identities = 137/188 (73%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATCGAGAACGTCAAA 178001 || || || ||||| ||||||||||||| ||| ||||| ||||||||||| || Sbjct 2266 ACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC---GACACGATCGAGAACGTGAAG 2210 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || || || || || |||||||| || || || ||||| || Sbjct 2209 GCGAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGCCTCATTTTCGCTGGC 2150 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || ||||| || || || | || || || || || ||| |||| || || || || ||| Sbjct 2149 AAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAACATCCAGAAGGAGTCGACGCTG 2090 Query 178122 CATCTTGT 178129 || || || Sbjct 2089 CACCTCGT 2082 >seq7780 Length=1467 Score = 125 bits (138), Expect = 2e-23 Identities = 154/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCA 177980 || || |||||||| || || || || || ||||| ||||||||||||| ||| Sbjct 145 CAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC--- 201 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||||||||| || ||||| |||||||| || || || ||||| |||||| Sbjct 202 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 261 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || || ||||| || || ||||| || || || | || || || || || ||| Sbjct 262 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 321 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || ||||| || || Sbjct 322 ATCCAGAAGGAGTCGACGCTGCACCTCGT 350 Score = 125 bits (138), Expect = 2e-23 Identities = 154/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCA 177980 || || |||||||| || || || || || ||||| ||||||||||||| ||| Sbjct 602 CAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC--- 658 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||||||||| || ||||| |||||||| || || || ||||| |||||| Sbjct 659 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 718 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || || ||||| || || ||||| || || || | || || || || || ||| Sbjct 719 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 778 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || ||||| || || Sbjct 779 ATCCAGAAGGAGTCGACGCTGCACCTCGT 807 Score = 123 bits (136), Expect = 6e-23 Identities = 155/210 (74%), Gaps = 7/210 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCA 177980 || || |||||||| || || || || || ||||| ||||||||||||| ||| Sbjct 373 CAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC--- 429 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||||||||| || ||||| |||||||| || || || ||||| |||||| Sbjct 430 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 489 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGG-ACTCTTGCCGATTATAA 178099 || || || || ||||| || || ||||| || || || || || || || || || || Sbjct 490 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGGCACGCTCGCGGACTACAA 549 Query 178100 CGTCCAAAAAGAATCAACACTGCATCTTGT 178129 | |||| || || || || ||||| || || Sbjct 550 CATCCAGAAGGAGTCGACGCTGCACCTCGT 579 >seq6241 Length=2159 Score = 125 bits (138), Expect = 2e-23 Identities = 154/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || |||||||| || || || || || ||||| ||||||||||||| ||| Sbjct 1901 CAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC--- 1845 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||||||||| || ||||| |||||||| || || || ||||| |||||| Sbjct 1844 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 1785 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || || ||||| || || ||||| || || || | || || || || || ||| Sbjct 1784 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 1725 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || ||||| || || Sbjct 1724 ATCCAGAAGGAGTCGACGCTGCACCTCGT 1696 Score = 125 bits (138), Expect = 2e-23 Identities = 152/206 (74%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGAC 177983 || |||||||| || || || || || ||||| ||||||||||||| ||| ||| Sbjct 2126 ATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC---GAC 2070 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||| || ||||| |||||||| || || || ||||| |||||||| Sbjct 2069 ACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGCAG 2010 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || || ||||| || || || | || || || || || ||| || Sbjct 2009 CGTCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAACATC 1950 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||| || || Sbjct 1949 CAGAAGGAGTCGACGCTGCACCTCGT 1924 >seq6220 Length=1461 Score = 125 bits (138), Expect = 2e-23 Identities = 154/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || ||||| ||||| ||| | || || || ||||| ||||||||||||| ||| Sbjct 812 CAGATTTTTGTGAAGACTTTAACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC--- 756 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||||||||| || ||||| |||||||| || || || ||||| |||||| Sbjct 755 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 696 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || || ||||| || || ||||| || || || | || || || || || ||| Sbjct 695 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 636 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || ||||| || || Sbjct 635 ATCCAGAAGGAGTCGACGCTGCACCTCGT 607 Score = 89.7 bits (98), Expect = 1e-12 Identities = 148/211 (70%), Gaps = 11/211 (5%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || |||||||| || || || || || ||||| ||||||||||||| ||| Sbjct 368 CAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC--- 312 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||||||||| || ||||| |||| || ||| | || | |||||| Sbjct 311 GACACGATCGAGAACGTGAAGGCGAAGATCCAGG---CAGGAGGCAGTCCACGCGACCAG 255 Query 178041 C--AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATA 178098 | | || || || ||||| || || ||||| || || || | || || || || || | Sbjct 254 CGGANCGGCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACA 195 Query 178099 ACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 || |||| || || || || ||||| || || Sbjct 194 ACATCCAGAAGGAGTCGACGCTGCACCTCGT 164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203463783966766