Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2451 170 4e-37 seq170 143 6e-29 >seq2451 Length=1853 Score = 170 bits (188), Expect = 4e-37 Identities = 314/447 (70%), Gaps = 19/447 (4%) Strand=Plus/Plus Query 230203 GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGT 230262 || || ||||| | || ||||| |||||||||||||| |||||| ||| ||| Sbjct 993 GTGGAGGGTATCTTCTTCTCCGGCTCCTTCTGCGCCATCTTCTGGCTGAAGAAGCGCGGT 1052 Query 230263 GTGATGCCTGGCCT--CGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATC 230320 |||||||| ||||| || || || |||||| |||| |||||||||||||| || Sbjct 1053 GTGATGCCCGGCCTGACGTTCAGT--AACGAGCTCATTTCCCGCGACGAGGGTCTGCACA 1110 Query 230321 AACAGTTCGGCGAGCTTATGTATTCAA-AGC----TCCAGAACAAGCTACCATTCGAGAC 230375 | || | | || |||| ||| ||| || || ||||||| || ||| || Sbjct 1111 CGGACTTTGCCTGCCTCCTGTA--CAACAGCCACATCAAGCACAAGCTGCCCCGCGA-AC 1167 Query 230376 G-GTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGA--CGC 230432 | || | ||||| || || || |||| | ||| ||||||||||| || || ||| Sbjct 1168 GCGTGCTGAACATCATCACGGACGCTGTTGCGATCGAGAAGGAGTTCATCTGCGAGTCGC 1227 Query 230433 TATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGT 230492 | || || ||||| |||||||||||||| || || ||| | |||||||| || || || Sbjct 1228 T-GCCCGTG-CGCCTGATTGGCATGAACGCGGACCTGATGAGCCAGTACATTGAGTTTGT 1285 Query 230493 AGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTT 230552 || ||||| | ||||| | || ||| | ||||| ||| | | |||||| || Sbjct 1286 TGCGGACCGTCTGCTTGTTTCCCTCGGTGAGGAGAAGCACTACGGTGCGACGAACCCTTT 1345 Query 230553 TGCATTTATGGAGCTCATTTCGCTTCA-AGGGAAGACCAACTTCTTCGAAAAGCGTGTCA 230611 || || |||||| | ||||| ||| | || ||||||||||| ||||| ||| || Sbjct 1346 TGACTTCATGGAGATGATTTC-CTTGACCGGTAAGACCAACTTTTTCGATAAGAAGGTTG 1404 Query 230612 GTGACTATCAGAGGCCTGGTGTGATGA 230638 |||| || |||| | |||||||||||| Sbjct 1405 GTGAGTACCAGAAGGCTGGTGTGATGA 1431 >seq170 Length=23694 Score = 143 bits (158), Expect = 6e-29 Identities = 189/256 (74%), Gaps = 6/256 (2%) Strand=Plus/Plus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGA--CGCTATTCCATGTC 230443 ||||| || || || |||| | ||| ||||||||||| || || |||| || || | Sbjct 113 ATCATCACGGACGCTGTTGCGATCGAGAAGGAGTTCATCTGCGAGTCGCT-GCCCGTG-C 170 Query 230444 GCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCA 230503 |||| |||||||||||||| || || ||| | |||||||| || || || || ||||| Sbjct 171 GCCTGATTGGCATGAACGCGGACCTGATGAGCCAGTACATTGAGTTTGTTGCGGACCGTC 230 Query 230504 TTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGG 230563 | ||||| | || ||| | ||||| ||| | | |||||| |||| || |||| Sbjct 231 TGCTTGTTTCCCTCGGTGAGGAGAAGCACTACGGTGCGACGAACCCTTTTGACTTCATGG 290 Query 230564 AGCTCATTTCGCTTCA-AGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAG 230622 || | ||||| ||| | || ||||||||||| ||||||||| || |||| |||||| Sbjct 291 AGATGATTTC-CTTGACCGGTAAGACCAACTTTTTCGAAAAGAAGGTTGGTGAGTATCAG 349 Query 230623 AGGCCTGGTGTGATGA 230638 | | |||||||||||| Sbjct 350 AAGGCTGGTGTGATGA 365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057747884274080