Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq3993 131 1e-25 seq4373 122 7e-23 seq5372 116 3e-21 seq1880 116 3e-21 seq4543 114 1e-20 seq1044 114 1e-20 seq587 105 6e-18 seq5243 98.7 8e-16 seq2033 98.7 8e-16 >seq3993 Length=1029 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | |||||| | |||| || |||||||| || ||||| |||||||| Sbjct 59 CCGCCGCGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 118 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||||||| ||||| || |||| || | ||||||||| ||| Sbjct 119 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGGGGA 178 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | ||| || || | | |||| Sbjct 179 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 238 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | || ||| |||||||||||||| || || ||||| || ||||| || Sbjct 239 TCGAGGGCAATCGTCTTGCCGGTTAAAGTCTTCACAAAAATCTGCATGTT 288 >seq4373 Length=891 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | |||||| | |||| || |||||||| || ||||| |||||||| Sbjct 646 CCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCA 705 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||||||| ||||| || |||| || | ||||||||| ||| Sbjct 706 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGGGGA 765 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | ||| || || | | |||| Sbjct 766 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 825 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||| ||||||||||| | ||| || || || || ||||| Sbjct 826 TCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 872 >seq5372 Length=561 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | |||||| | |||| || |||||||| || ||||| |||||||| Sbjct 45 CCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 104 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||||||| ||||| || |||| || | ||||||||| || Sbjct 105 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGA 164 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | ||| || || | | |||| Sbjct 165 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 224 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||| ||||||||||| | ||| || || || || ||||| Sbjct 225 TCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 271 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | |||||| | |||| || |||||||| || ||||| |||||||| Sbjct 273 CCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 332 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||||||| ||||| || |||| || | ||||||||| || Sbjct 333 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGA 392 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | ||| || || | | |||| Sbjct 393 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 452 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||| ||||||||||| | ||| || || || || ||||| Sbjct 453 TCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 499 >seq1880 Length=2433 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | |||||| | |||| || |||||||| || ||||| |||||||| Sbjct 2203 CCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 2262 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||||||| ||||| || |||| || | ||||||||| || Sbjct 2263 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGA 2322 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | ||| || || | | |||| Sbjct 2323 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 2382 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||| ||||||||||| | ||| || || || || ||||| Sbjct 2383 TCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 2429 >seq4543 Length=829 Score = 114 bits (126), Expect = 1e-20 Identities = 161/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | |||||| | |||| || |||||||| || ||||| |||||||| Sbjct 604 CCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 663 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||||||| ||||| || |||| || | ||||||||| || Sbjct 664 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGA 723 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | ||| || || | | |||| Sbjct 724 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 783 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCA 21174 || | || ||| ||||||||||| | ||| || || || || |||| Sbjct 784 TCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCA 829 >seq1044 Length=4624 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | |||||| | || | ||||||||||| || || || |||||||| Sbjct 939 CCACCGCGCAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGCG 880 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||||||||| ||||| || | || || | |||||||||| ||| Sbjct 879 AGGGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 820 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| || || | ||| || || | || ||| Sbjct 819 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACC 760 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | || |||||||| ||||| | || || ||||| || |||||| Sbjct 759 TCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACAAAAATCTGCATT 712 >seq587 Length=8987 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | |||||| | || | ||||||||||| || ||||| ||||| || Sbjct 1911 CCACCGCGCAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 1852 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||||||||| || || || | || || | |||||||||| ||| Sbjct 1851 AGGGTGCGGCCCTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 1792 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| || || | ||| || || | || ||| Sbjct 1791 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACC 1732 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | || |||||||| ||||| | || || || || || |||||| Sbjct 1731 TCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCATT 1684 >seq5243 Length=600 Score = 98.7 bits (108), Expect = 8e-16 Identities = 163/234 (70%), Gaps = 1/234 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | || | |||||||| || || ||||| |||||||| Sbjct 572 CCACCGCGAAGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCG 513 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||| ||||| || || || | || || | |||||||||| ||| Sbjct 512 AGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 453 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| || || | ||| || || | || ||| Sbjct 452 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACC 393 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT-TTGAA 21181 || | || |||||||| ||||| | || || || || || |||||| ||||| Sbjct 392 TCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCATTCTTGAA 339 >seq2033 Length=2245 Score = 98.7 bits (108), Expect = 8e-16 Identities = 163/234 (70%), Gaps = 1/234 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | || | |||||||| || || ||||| |||||||| Sbjct 434 CCACCGCGAAGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCG 375 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||| ||||| || || || | || || | |||||||||| ||| Sbjct 374 AGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 315 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| || || | ||| || || | || ||| Sbjct 314 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACC 255 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT-TTGAA 21181 || | || |||||||| ||||| | || || || || || |||||| ||||| Sbjct 254 TCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCATTCTTGAA 201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422230298469056