Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2451 298 6e-76 seq587 172 6e-38 seq1044 163 3e-35 seq5243 158 1e-33 seq2033 158 1e-33 seq5372 143 3e-29 seq4373 143 3e-29 seq1880 143 3e-29 seq4543 141 1e-28 seq3993 134 1e-26 seq5492 123 3e-23 >seq2451 Length=1853 Score = 298 bits (330), Expect = 6e-76 Identities = 547/794 (69%), Gaps = 12/794 (2%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||| | | ||||||||| ||| |||||| | ||||| || || |||| ||| Sbjct 513 GAGCCGCTCCGCCAGGAGAACCCCTACCGCTTCGTGCTGTTCCCGATCCAGTACCACGAC 572 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||||||| |||||| || ||| | ||||||| | || ||| | |||||| Sbjct 573 ATCTGGCGCAAGTACAAGGAGCAGGAGAGCTGCATCTGGACGTTGGAAGAGATTGACCTG 632 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 || ||| | ||||||| | ||| || |||| || ||||||||| || Sbjct 633 GGGAACGACCTGGTTGACTGGGTGAAGCTGACGGAGGGTGAGCAGCACTTCATCAAGTAC 692 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815 ||| ||||||| || || | ||||||||||||||| | ||||| || | |||| ||| Sbjct 693 GTGTTGGCCTTCTTTGCTGGCAGCGACGGCATCGTGATTGAGAACCTCGCTCAGCGCTTC 752 Query 116816 GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAG 116875 ||| ||| || | |||||||||| |||||||| || ||| | |||||| Sbjct 753 ATGACGGACGTGAAGATTCCCGAGGCGCGCGCGTTCTACGGGTTCCAGCTGATGATGGAG 812 Query 116876 AACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAG 116935 ||| | ||||| || | || ||| || | || || ||| | | || ||| Sbjct 813 AACATCCACTCCGAGACCTACTCGGTGCTGCTGGATACCTACATCTCCGACAATGACGAG 872 Query 116936 AAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGG 116995 ||| | || || | || ||| ||||||| |||| || | | ||||| |||||| Sbjct 873 AAGGTGAAGCTGCTGCATGCGATCCAGACGATCCCGTCGATCCAGAACAAGGCGGAGTGG 932 Query 116996 GCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCG 117055 || |||| ||||||| |||| ||||| |||| ||||||||| | | || || Sbjct 933 GCCGTGCGTTGGATCG---GCAGCGAGGCGAGCTTCCAGGAGCGCCTGATTGGTTTTGCT 989 Query 117056 GCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGC 117115 ||||| ||||| ||||||| || ||| ||| |||||| || ||||| ||||| ||| Sbjct 990 GCCGTGGAGGGTATCTTCTTCTCCGGCTCCTTCTGCGCCATCTTCTGGCTGAAGAAGCGC 1049 Query 117116 GGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCAT 117175 || | |||||||||||||| ||||| ||||||||||| ||| | |||||||||||||| Sbjct 1050 GGTGTGATGCCCGGCCTGACGTTCAGTAACGAGCTCATTTCCCGCGACGAGGGTCTGCAC 1109 Query 117176 TGCGACTTTGCCTGTTTGCTGTTCAA---GCATTTGGTGCAGCGACCGAGCGCGGCG--C 117230 ||||||||||| | |||| ||| || | ||| | | | || | ||| | Sbjct 1110 ACGGACTTTGCCTGCCTCCTGTACAACAGCCACATCAAGCA-CAAGC-TGCCCCGCGAAC 1167 Query 117231 GCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGC 117290 |||| | | ||| |||| ||||| || || |||||| || ||| || ||| ||| Sbjct 1168 GCGTGCTGAACATCATCACGGACGCTGTTGCGATCGAGAAGGAGTTCATCTGCGAGTCGC 1227 Query 117291 TGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTC 117349 |||| ||||| ||| | || | || ||| | | |||| || ||||| ||||| || Sbjct 1228 TGCCCGTGCGCCTGATTGGCATGAA-CGCGGACCTGATGAGCCAGTACATTGAGTTTGTT 1286 Query 117350 GCCGACAGGCTGCT 117363 || ||| | ||||| Sbjct 1287 GCGGACCGTCTGCT 1300 >seq587 Length=8987 Score = 172 bits (190), Expect = 6e-38 Identities = 179/232 (77%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 || |||||| || ||||| || || ||||| || || |||||| || |||| ||||| || Sbjct 1681 AAGAATGCAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGC 1740 Query 40746 CACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 || ||||| | | | |||| |||||| || || | ||||| || || |||||| ||| Sbjct 1741 CAGCGACACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGG 1799 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 ||||||| || ||||||| ||| || || |||||||| || | ||||||||| ||||| Sbjct 1800 ACCAGCAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGAGGGCCGCACCCTCGCCGACT 1859 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||||||| |||| || || || ||| | ||| || | || || Sbjct 1860 ACAACATCCAGAAGGAGTCCACCCTCCACCTCGTGCTCCGCCTGCGCGGTGG 1911 >seq1044 Length=4624 Score = 163 bits (180), Expect = 3e-35 Identities = 177/232 (76%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 || |||||| || || || || || ||||| || || |||||| || |||| ||||| || Sbjct 709 AAGAATGCAGATTTTTGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGC 768 Query 40746 CACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 || ||||| | | | |||| |||||| || || | ||||| || || |||||| ||| Sbjct 769 CAGCGACACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGG 827 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 ||||||| || ||||||| ||| ||||| |||||||| || | ||||||||| |||| Sbjct 828 ACCAGCAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACCCTCGCGGACT 887 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||| |||||||||||| |||| || || || ||| | ||| || | || || Sbjct 888 ACAATATCCAGAAGGAGTCCACCCTCCACCTCGTGCTCCGCCTGCGCGGTGG 939 >seq5243 Length=600 Score = 158 bits (174), Expect = 1e-33 Identities = 169/221 (76%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 || |||||| || ||||| || || ||||| || || |||||| || |||| ||||| || Sbjct 342 AAGAATGCAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGC 401 Query 40746 CACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 || ||||| | | | |||| |||||| || || | ||||| || || |||||| ||| Sbjct 402 CAGCGACACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGG 460 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 ||||||| || ||||||| ||| || || ||||| || || | ||||||||| |||| Sbjct 461 ACCAGCAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGAGGGCCGCACCCTCGCGGACT 520 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 ||||||||||||| ||| |||| || || || ||| | ||| Sbjct 521 ACAACATCCAGAAAGAGTCCACCCTCCACCTCGTGCTCCGC 561 >seq2033 Length=2245 Score = 158 bits (174), Expect = 1e-33 Identities = 169/221 (76%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 || |||||| || ||||| || || ||||| || || |||||| || |||| ||||| || Sbjct 204 AAGAATGCAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGC 263 Query 40746 CACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 || ||||| | | | |||| |||||| || || | ||||| || || |||||| ||| Sbjct 264 CAGCGACACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGG 322 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 ||||||| || ||||||| ||| || || ||||| || || | ||||||||| |||| Sbjct 323 ACCAGCAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGAGGGCCGCACCCTCGCGGACT 382 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 ||||||||||||| ||| |||| || || || ||| | ||| Sbjct 383 ACAACATCCAGAAAGAGTCCACCCTCCACCTCGTGCTCCGC 423 >seq5372 Length=561 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||| || ||||| || || || |||| || || || | | Sbjct 271 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 212 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || || | ||||| |||||||| || | ||||| Sbjct 211 GACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCA 153 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||| | ||| ||||| |||||||| || | ||||| ||| |||||||| Sbjct 152 GCAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAA 93 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| | |||||||| || ||| | ||| || | ||||| Sbjct 92 CATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGTGGCGG 45 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||| || ||||| || || || |||| || || || | | Sbjct 499 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 440 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || || | ||||| |||||||| || | ||||| Sbjct 439 GACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCA 381 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||| | ||| ||||| |||||||| || | ||||| ||| |||||||| Sbjct 380 GCAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAA 321 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| | |||||||| || ||| | ||| || | ||||| Sbjct 320 CATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGTGGCGG 273 >seq4373 Length=891 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||| || ||||| || || || |||| || || || | | Sbjct 872 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 813 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || || | ||||| |||||||| ||| | ||||| Sbjct 812 GACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCA 754 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||| | ||| ||||| |||||||| || | ||||| || |||||||| Sbjct 753 GCAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTTGCGGACTACAA 694 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| | |||||||| || ||| | ||| || | ||||| Sbjct 693 CATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGTGGCGG 646 >seq1880 Length=2433 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||| || ||||| || || || |||| || || || | | Sbjct 2429 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 2370 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || || | ||||| |||||||| || | ||||| Sbjct 2369 GACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCA 2311 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||| | ||| ||||| |||||||| || | ||||| ||| |||||||| Sbjct 2310 GCAGCGTCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAA 2251 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| | |||||||| || ||| | ||| || | ||||| Sbjct 2250 CATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGTGGCGG 2203 >seq4543 Length=829 Score = 141 bits (156), Expect = 1e-28 Identities = 169/227 (74%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 40691 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCG 40750 |||| || ||||| || ||||| || ||||| || || || |||| || || || | || Sbjct 829 TGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGCG 770 Query 40751 ACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 ||| | | |||| | |||| || || | ||||| |||||||| || | |||||| Sbjct 769 ACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 711 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||| | ||| ||||| |||||||| || | ||||| ||| ||||||||| Sbjct 710 CAGCGTCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 651 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | |||||||| || ||| | ||| || | ||||| Sbjct 650 ATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGTGGCGG 604 >seq3993 Length=1029 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || || || || | || ||||| || || || |||| || || || Sbjct 288 AACATGCAGATTTTTGTGAAGACTTTAACCGGCAAGACGATTGCCCTCGAGGTGGAGGCG 229 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | ||||| | | |||| | |||| || || | ||||| |||||||| ||| | || Sbjct 228 AGCGACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCTGA 170 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || ||||| | ||| ||||| |||||||| || | ||||| ||| ||||| Sbjct 169 CCAGCAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTA 110 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||||||| | |||||||| || ||| | ||| || | ||||| Sbjct 109 CAACATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGCGGCGG 59 >seq5492 Length=529 Score = 123 bits (136), Expect = 3e-23 Identities = 141/187 (75%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 || |||||| || ||||| || || ||||| || || |||||| || |||| ||||| || Sbjct 344 AAGAATGCAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGC 403 Query 40746 CACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 || ||||| | | | |||| |||||| || || | ||||| || || |||||| ||| Sbjct 404 CAGCGACACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGG 462 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 ||||||| || ||||||| ||| || || ||||| || || | ||||||| |||| Sbjct 463 ACCAGCAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGAGGGCCGCACCCCTGCGGACT 522 Query 40865 ACAACAT 40871 ||||||| Sbjct 523 ACAACAT 529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515183031612160