Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq5243 123 2e-23 seq2033 123 2e-23 seq2451 118 9e-22 seq587 118 9e-22 seq1044 114 1e-20 seq3993 113 4e-20 seq1880 113 4e-20 seq1 113 4e-20 seq4543 111 1e-19 seq5372 109 5e-19 seq5492 104 2e-17 seq4373 104 2e-17 >seq5243 Length=600 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| ||||| | | | ||| | ||||| || |||||||| || |||||||| || Sbjct 573 ACCACCGCGAAGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGC 514 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | ||||| ||||||||||| || |||||| |||||||||||||||| || || || Sbjct 513 GAGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 454 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || |||||||| || || || || | |||| |||||| || |||||| Sbjct 453 GATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGAC 394 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || | || || ||||| || || || || ||||||||||| Sbjct 393 CTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCAT 346 >seq2033 Length=2245 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| ||||| | | | ||| | ||||| || |||||||| || |||||||| || Sbjct 435 ACCACCGCGAAGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGC 376 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | ||||| ||||||||||| || |||||| |||||||||||||||| || || || Sbjct 375 GAGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 316 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || |||||||| || || || || | |||| |||||| || |||||| Sbjct 315 GATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGAC 256 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || | || || ||||| || || || || ||||||||||| Sbjct 255 CTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCAT 208 >seq2451 Length=1853 Score = 118 bits (130), Expect = 9e-22 Identities = 185/257 (72%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 44936 GGAGTGATGCCCGGACTGACGTTTAGCAACGAATTGATTTCGAGAGACGAAGGTCTGCAC 44995 || ||||||||||| |||||||| || ||||| | ||||| | ||||| ||||||||| Sbjct 1050 GGTGTGATGCCCGGCCTGACGTTCAGTAACGAGCTCATTTCCCGCGACGAGGGTCTGCAC 1109 Query 44996 ACCAACTTTGCCTGCCTCTACTATAATA-CGAGAGTCGATCAAAAGTTGGACGCGCCCAC 45054 || |||||||||||||| || || | | | | || | || ||| | | | ||| || Sbjct 1110 ACGGACTTTGCCTGCCTCCTGTACAACAGCCACA-TCAAGCACAAGCT-GCCCCGCGAAC 1167 Query 45055 -CGTCAACGACATGTTCTCCGAAGCCGTGGCCATCGAGATGGAATT-TTTTGCTGAGGCT 45112 ||| |||| || | || || || || ||||||| ||| || | ||| ||| | Sbjct 1168 GCGTGCTGAACATCATCACGGACGCTGTTGCGATCGAGAAGGAGTTCATCTGC-GAGTCG 1226 Query 45113 CTGCCCGAATCGTTGGTGGGAATGAACGCGAATATGATGAGAAAGTACATTGAGTTTGTC 45172 ||||||| || | || ||||||||| | ||||||| |||||||||||||||| Sbjct 1227 CTGCCCGTGCGCCTGATTGGCATGAACGCGGACCTGATGAGCCAGTACATTGAGTTTGTT 1286 Query 45173 GCCGATCGTCTTCTCGT 45189 || || ||||| || || Sbjct 1287 GCGGACCGTCTGCTTGT 1303 >seq587 Length=8987 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| ||||| | | | ||| | ||||| || ||||| || || |||||||| ||| Sbjct 1912 ACCACCGCGCAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 1853 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | ||||| ||||| ||||| || |||||| |||||||||||||||| || || || Sbjct 1852 GAGGGTGCGGCCCTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 1793 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || |||||||| || || || || | |||| |||||| || |||||| Sbjct 1792 GATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGAC 1733 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || | || || ||||| || || || || ||||||||||| Sbjct 1732 CTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCAT 1685 >seq1044 Length=4624 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| ||||| | | | ||| | ||||| || ||||| || || || ||||| || Sbjct 940 ACCACCGCGCAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGC 881 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | ||||| ||||| ||||| || |||||| |||||||||||||||| || || || Sbjct 880 GAGGGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 821 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || |||||||| || || || || | |||| |||||| || |||||| Sbjct 820 GATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGAC 761 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || | || || ||||| || || || |||||||||||||| Sbjct 760 CTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACAAAAATCTGCAT 713 >seq3993 Length=1029 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| ||||| | | | ||| | ||| | || ||||| || || |||||||| || Sbjct 57 TACCGCCGCGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCG 116 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||| ||||| ||||| || |||||| | ||||| |||||||| || || | Sbjct 117 CGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGGG 176 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | |||||||||||||| || || || || | |||| ||||| | ||| | Sbjct 177 GAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCA 236 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||||| || | ||| |||||||| | ||| || ||||||||||||||| Sbjct 237 CCTCGAGGGCAATCGTCTTGCCGGTTAAAGTCTTCACAAAAATCTGCATG 286 >seq1880 Length=2433 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || || |||||||| || | ||||| ||||| Sbjct 2220 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTC 2279 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || |||||| | |||||||||||||| || ||||| |||||||||||||| Sbjct 2280 CAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTG 2339 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||||| | ||| ||||||| || | ||| || Sbjct 2340 GATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTT 2399 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||||| || || || || |||||||| Sbjct 2400 GCCGGTCAGCGTCTTCACGAAGATCTGCAT 2429 >seq1 Length=157016 Score = 113 bits (124), Expect = 4e-20 Identities = 368/569 (65%), Gaps = 7/569 (1%) Strand=Plus/Plus Query 133782 TCGACGTCGACGCACTTGTTGACGGCAATACTGGCTAGATTACAAACGGCCGTCTCGTTC 133841 || |||||||| ||||| ||| ||| || ||| || || || ||||| ||||| | | Sbjct 22647 TCCACGTCGACAAACTTGCTGAGGGCGATGGAGGCGAGGTTGCAGACGGCGGTCTCATCC 22706 Query 133842 TCGTCGCAATACTGGACGATCTCGGCGCAGAGGTTGCTGCATTTGATGGTGCCCAAAttt 133901 | | | |||| || ||||| | ||| || ||| ||| |||||||| |||||||| Sbjct 22707 TTGGAGGTGTACTCGATAATCTCCGTGCACAGATTGGAGCACTTGATGGTACCCAAATTC 22766 Query 133902 ttttGATTGCTAAAGTTATTGCAATGATCCTTGTATAGCATGTACGGCCCGCCGGTTTCG 133961 || |||||| || ||||| |||||||| |||||| | || ||||||| ||| Sbjct 22767 TTCTGATTGGATTTCTTGTTGCAGGCGTCCTTGTACAGCATGAAAGGGACGCCGGTCTCG 22826 Query 133962 ACGTTGGTCTCGACGATAAATCTAA--ACAAGTCTCTCGCCTTCACCTGCCTTTCGTACA 134019 | || | || ||| || || ||||||| |||| | | | | || || Sbjct 22827 GTCTGGGACATGAGGATC--TCAAACCACAAGTCCTGCGCCGGAATCGTCTTGACGCCCA 22884 Query 134020 CTTGAGCATTTTCGTAGTCGCAATATCTCATTTCGAAATCAAAACCGTATTTGTCGGCGA 134079 | |||||||| || || || ||||| || ||||| |||| | Sbjct 22885 TTCCCTTCTTTTCGTACTCCTCGTACTTCCGCTCGAACTCCTCGCCGTAGCAGTCGCTCA 22944 Query 134080 GGTCAGGGCATGTTTTGTGAGAGAATAGCGACCACATTTGATTGTTCTTTACGCGTTTCA 134139 || | | ||| ||| | | |||| |||| | | | ||| || || |||| Sbjct 22945 GGCCTGTGCACACGTTGGGGTCCATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCA 23004 Query 134140 TGAATAGATCGGGAATCCACAGGCCGAGCATTAAATCGCGAGCTTTAGTGTCTTCGGAGC 134199 |||| ||||| |||||||| ||| || | | |||||| || ||| || | Sbjct 23005 TGAAGAGATCAGGAATCCAAAGGGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTAC 23064 Query 134200 CCATGTTGCGTCTCAAGTTGAGAAACTCATAAATTTCCGGATGCCACGGCTCGATGTAGG 134259 | |||| || ||| | || ||||| | | || | ||||||||||||| ||| Sbjct 23065 CGGTGTTTCGCTTCAGGCGGACGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACA 23124 Query 134260 CGGCGAGGGCACCTTTTCGCTTA---CCACCCTGGTCGACGTGACGCACCATGTTGTTGA 134316 |||||| |||||| || |||||| ||||||||||| |||| || | |||| |||| Sbjct 23125 CGGCGAAGGCACCCTTACGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGA 23184 Query 134317 AGACTCTCAACATATTGACGAGACCGCTG 134345 | || | | ||| ||||||||| || Sbjct 23185 ACACACGGAGCATGGGCACGAGACCGTTG 23213 >seq4543 Length=829 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || || |||||||| || | ||||| ||||| Sbjct 621 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTC 680 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || |||||| | |||||||||||||| || ||||| |||||||||||||| Sbjct 681 CAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTG 740 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||||| | ||| ||||||| || | ||| || Sbjct 741 GATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTT 800 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCA 118737 ||||||||| || || || || ||||||| Sbjct 801 GCCGGTCAGCGTCTTCACGAAGATCTGCA 829 >seq5372 Length=561 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || || |||||||| || | ||||| ||||| Sbjct 62 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTC 121 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || |||||| | ||||| |||||||| || ||||| |||||||||||||| Sbjct 122 CAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTG 181 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||||| | ||| ||||||| || | ||| || Sbjct 182 GATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTT 241 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||||| || || || || |||||||| Sbjct 242 GCCGGTCAGCGTCTTCACGAAGATCTGCAT 271 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || || |||||||| || | ||||| ||||| Sbjct 290 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTC 349 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || |||||| | ||||| |||||||| || ||||| |||||||||||||| Sbjct 350 CAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTG 409 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||||| | ||| ||||||| || | ||| || Sbjct 410 GATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTT 469 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||||| || || || || |||||||| Sbjct 470 GCCGGTCAGCGTCTTCACGAAGATCTGCAT 499 >seq5492 Length=529 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||||||||| || |||||| |||||||||||||||| || || || || || |||||| Sbjct 502 TCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTG 443 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || || || || || | |||| |||||| || ||||||||||| || | Sbjct 442 TCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATG 383 Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || ||||| || || || || ||||||||||| Sbjct 382 GTCTTACCGGTGAGGGTCTTCACGAAAATCTGCAT 348 >seq4373 Length=891 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || || |||||||| || | ||||| ||||| Sbjct 663 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGCGTGCGGCCCTCCTC 722 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || |||||| | ||||| |||||||| || || || |||||||||||||| Sbjct 723 CAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTG 782 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||||| | ||| ||||||| || | ||| || Sbjct 783 GATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTT 842 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||||| || || || || |||||||| Sbjct 843 GCCGGTCAGCGTCTTCACGAAGATCTGCAT 872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433800706478272