Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 2e-13 seq2451 87.8 2e-12 >seq1 Length=157016 Score = 91.5 bits (100), Expect = 2e-13 Identities = 184/273 (67%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 63239 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63298 ||||| || ||||| ||| || ||||| || || ||||| |||||||||||||||||||| Sbjct 22967 CATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAG 23026 Query 63299 AGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63358 || ||| ||||| | | | || ||||| || || || || || || || Sbjct 23027 GGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTTTCGCTTCAGGCGGAC 23086 Query 63359 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63418 |||| | | | || | |||||||| || | ||| | ||| | | || || || Sbjct 23087 GAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTT 23146 Query 63419 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63478 || ||||| || | ||| | ||||||||||| | || | | ||| || | | Sbjct 23147 ACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAG 23206 Query 63479 ACCGTTTGATATACCATTGGTACCGGAGATATA 63511 |||||| || |||| || ||||||| ||| || Sbjct 23207 ACCGTTGGAGGTACCGTTCGTACCGGCGATGTA 23239 >seq2451 Length=1853 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655 ||||||||||||||| | ||| | |||||| ||||| || |||||||| | || Sbjct 1109 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 1050 Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715 ||||| || ||||| || |||| ||| || ||||| |||||||| || || || || Sbjct 1049 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 990 Query 33716 AGCAAAGGCAATAAGTCTCTC 33736 |||||| |||| || | ||| Sbjct 989 AGCAAAACCAATCAGGCGCTC 969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629773386804480