Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq407 125 6e-24 >seq407 Length=12820 Score = 125 bits (138), Expect = 6e-24 Identities = 303/452 (67%), Gaps = 10/452 (2%) Strand=Plus/Plus Query 20888 CGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTA 20947 |||||| | ||||| | || |||||| | | || | || ||||| ||| |||| Sbjct 9302 CGGAAAGGCCCGCGGCACGCGCCTCAGCTGCTCCTGGAGCGCCTCCACGTGATTGCTGTA 9361 Query 20948 AACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGC 21007 ||||||||||| || | |||||| || | || || || ||| || ||| | || Sbjct 9362 GACGTGGGCGTCCCCGAGGGTGTGTACCAGCTCCCCTGGCTTCAACCCAGTGCTCTTGGC 9421 Query 21008 GATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTC 21067 ||||| |||||| |||||||||||||| ||||||||||| ||||| || ||||| || Sbjct 9422 AATCAGTATCGTCAGCAGGGCGTAGCTGGCAATGTTAAACGGTACCCCCAGCCCCATATC 9481 Query 21068 GGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCC-----CGAG-CCACGTAAAACTG 21121 | | || || || ||| ||||||||||||| | | | |||||| || || Sbjct 9482 GCAGCTCCGTTGATAGAGCATGCAGGACAGCTCCTGCGTGTTGGTGTTCACGTAGAATTG 9541 Query 21122 ACACAAAACGTGACAAGGAGGGAGAGCCATC-CGCGCGAGGTCCGCGGGGTTCCACG-CG 21179 | || | || || || ||||| |||||| | || || | | ||||||||||| || Sbjct 9542 AGCCAGCAGATGGCATGGTGGGAGGGCCATCTCATGC-AGCGCGGAGGGGTTCCACGCCG 9600 Query 21180 CACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATCCACCACGTAACGCAGC 21239 | | | | || || | |||| ||| | || | ||||| | | | Sbjct 9601 TAAACAGCAAT-CGTCTGTCGTTGGGGTTTGTCTTGAGGGTTTCCACAATTTGCTTTATT 9659 Query 21240 TGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGT 21299 || || ||||||| || |||||||| | | | |||||| || ||||| ||| Sbjct 9660 TGATCGACCCCCTTTCCGTCGTAGTTTTCCTTGAAGGAGGTGTACTTTGCACCAAAGTGT 9719 Query 21300 CTCCACTGGAACCCGTACACCGGCCCCAGATC 21331 | |||||| |||||||||||||| || || || Sbjct 9720 CGCCACTGAAACCCGTACACCGGGCCAAGGTC 9751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427746720871680