Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2451 163 4e-35 >seq2451 Length=1853 Score = 163 bits (180), Expect = 4e-35 Identities = 582/885 (66%), Gaps = 30/885 (3%) Strand=Plus/Plus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 ||||| || ||| ||| || ||||| ||| | |||||| || || || | | Sbjct 549 CTGTTCCCGATCCAGTACCACGACATCTGGCGCAAGTACAAGGAGCAGGAGAGCTGCATC 608 Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114 |||||| | |||||| | || ||| || |||||| || |||| || | |||| Sbjct 609 TGGACGTTGGAAGAGATTGACCTGGGGAACGACCTGGTTGACTGGGTGAAGC---TGACG 665 Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 || ||||| | || || | || | |||||||||||||| ||| ||| || ||| Sbjct 666 GAGGGTGAGCAGCACTTCATCAAGTACGTGTTGGCCTTCTTTGCTGGCAGCGACGGCATC 725 Query 125175 GTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTG 125233 || | || || || | | | || ||| || ||| ||||| |||| | || | Sbjct 726 GTGATTGAGAACCTCGCTCAG-CGCTTCATGACGGACGTGAAGATTCCCGAGGCG-CGCG 783 Query 125234 CTTT-TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGA 125292 | || ||||| ||||| | ||||| |||||| | ||||| || | ||||| ||| Sbjct 784 CGTTCTACGGGTTCCAGCTGATGATGGAGAACATCCACTCCGAGACCTACTCGGTGCTGC 843 Query 125293 TTGACATGTACATTCGCGATCCGCAACGTAAACAC-ATGCTCTTTAACGCAATCGACACG 125351 | || | ||||| ||| | ||| || | ||| | | || ||| | ||| Sbjct 844 TGGATACCTACATCTCCGA-CAATGACGAGAAGGTGAAGCTGCTGCATGCGATCCAGACG 902 Query 125352 GTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGA--CAAGT 125409 | ||||| || | || ||||| | |||| | || ||||||| ||| | || Sbjct 903 ATCCCGTCGATCCAGAACAAGGCGGAGTGGGCCGTGCGTTGGATCGGCAGCGAGGCGAG- 961 Query 125410 CTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG-T 125468 |||| || | || |||| || || ||||| ||||| |||||||| || || | Sbjct 962 CTTCCAGGAGCGCCTGATTGGT----TTTGCTGCCGTGGAGGGTATCTTCTTCTCCGGCT 1017 Query 125469 AGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGT 125528 || |||| ||||||| ||||| ||||||||||| | |||||||| |||||| |||| Sbjct 1018 CCTTCTGCG-CCATCTTCTGGCTGAAGAAGCGCGGTGTGATGCCCGGCCTGACGTTCAGT 1076 Query 125529 AACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGC 125588 |||||| | || || || |||||||| || ||| ||||||||| || |||| | Sbjct 1077 AACGAGCTCATTTCCCGCGACGAGGGTCTGCACACGGACTTTGCCTGCCTCCTGT---AC 1133 Query 125589 AACTATCTGCGTCCCGAGTGC-AGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGA 125647 ||| | | | | | || | || | | || ||| || | ||||| | || || Sbjct 1134 AAC-AGCCACAT--CAAGCACAAGCTGCCCCG-CGAACGCGTGCTGAACATCATCACGGA 1189 Query 125648 TGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCAT 125707 || || ||| || | ||||| | ||| || || || || || |||||||||| Sbjct 1190 CGCTGTTGCGATCGAGAAGGAGTTCATCTGCGAGTCGCTGCCCGTGCGCCTGATTGGCAT 1249 Query 125708 GAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTAC-TGTACGAGT 125766 |||| | || ||| || ||||||| |||||||| || || ||||| | ||| | Sbjct 1250 GAACGCGGACCTGATGAGCCAGTACATTGAGTTTGTTGCGGACCGTCTGCTTGTTTCCCT 1309 Query 125767 TGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCAC 125826 | | | | ||| ||| || | ||| || ||||| |||||| | || || | Sbjct 1310 CGGTGAGGAG-AAGCACTACGGTGCGACGAACCCTTTTGACTTCATGGAGATGATTTC-C 1367 Query 125827 TAGA-GGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 | || |||||||||||||||||||| |||||||| | |||||| Sbjct 1368 TTGACCGGTAAGACCAACTTTTTCGATAAGAAGGTTGGTGAGTAC 1412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741007177644160