Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 1e-15 seq2451 84.2 3e-11 >seq1 Length=157016 Score = 98.7 bits (108), Expect = 1e-15 Identities = 189/279 (68%), Gaps = 0/279 (0%) Strand=Plus/Plus Query 63188 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63247 ||||| || ||||| ||| || ||||| || || ||||| |||||||||||||||||||| Sbjct 22967 CATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAG 23026 Query 63248 AGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63307 || ||| ||||| | || | || ||||| || || || || || || || Sbjct 23027 GGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTTTCGCTTCAGGCGGAC 23086 Query 63308 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63367 |||| | | | || | |||||||| || | ||| | ||| | | || || || Sbjct 23087 GAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTT 23146 Query 63368 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63427 || ||||| || | ||| | ||||||||||| | || | | ||| || | | Sbjct 23147 ACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAG 23206 Query 63428 ACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCC 63466 |||||| || |||| || ||||||| ||| || || || Sbjct 23207 ACCGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACC 23245 >seq2451 Length=1853 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 ||||||||||||||| | ||| || ||||| ||||| || |||||||| | || Sbjct 1109 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 1050 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 ||||| || ||||| || |||| ||| || || || |||||||| || || || || Sbjct 1049 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 990 Query 33438 AGCAAAGGCAATAAGTCTCTC 33458 |||||| |||| || | ||| Sbjct 989 AGCAAAACCAATCAGGCGCTC 969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622903469106560