Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 158 3e-33 >seq1 Length=157016 Score = 158 bits (174), Expect = 3e-33 Identities = 504/769 (66%), Gaps = 16/769 (2%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || |||||||| || || ||| ||| || || || | || || |||||| ||| Sbjct 23428 TTTACCCACGCCACCCCTACCCTGTTCAACGCCGGTACCCCGAAGCCTCAGATGAGTTCC 23369 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | ||||||||||| ||||| || || | ||||| || ||| | Sbjct 23368 TGCTTCCTCGTGGCCATGAAGGACGACAGTATCGATGGCATTTACGACACCCTCAAGGAG 23309 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGA--TCCACAATGTTCGTG 363724 || || || ||| || || || ||||| || || | | ||||| | || Sbjct 23308 TGCGCCACCATCAGTAAGGCGGCCGGTGGTATTGG-GT-TCCACGTTCACAACATCCGCT 23251 Query 363725 CACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 | |||||||| ||| || || ||| || || || || |||||||| | Sbjct 23250 CTTCCGGTAGTTACATCGCCGGTACGAACGGTACCTCCAACGGTCTCGTGCCCATGCTCC 23191 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 ||||||| | || || || | ||||| ||||||||||| || ||||| || || || | Sbjct 23190 GTGTGTTCAATAACACCGCCCGCTACGTGGACCAGGGTGGCGGTAAGCGTAAGGGTGCCT 23131 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-- 363902 | || |||| |||||||| || ||||| | || |||| | | | || ||| Sbjct 23130 TCGCCGTGTACCTCGAGCCGTGGCACGCCGACGTGTTCGAGT---TCGTCCGCCTGAAGC 23074 Query 363903 -AAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTG 363961 |||||| || || ||||| ||||| || |||||||| || || |||||| || ||| Sbjct 23073 GAAACACCGGTAAGGAGGACCAACGTGCCCGCGATCTGTTTTACGCCCTTTGGATTCCTG 23014 Query 363962 ACCATTTTATGAAGCGCGTGGAGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAA 364020 | | || |||||||| || ||| ||| || | ||| | || | ||| ||| Sbjct 23013 ATCTCTTCATGAAGCGTGTCAAGG-AGGAGGGACAGTGGACGCTGATGGACCCCAACGTG 22955 Query 364021 TGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTA-TACGAAAAGTATGA 364079 || |||| || ||| | || || || | | || | ||||| |||| || Sbjct 22954 TGCACAGGCCTGAGCGACTGCTACGGCGAGGAGT-TCGAGCGGAAGTACGAGGAGTACGA 22896 Query 364080 ATCGGAGGGAAAGGCTCGT-AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGG 364138 | | |||||| || ||| ||||| ||||| || ||| | | ||||||| ||| | Sbjct 22895 AAAGAAGGGAATGG-GCGTCAAGACGATTCCGGCGCAGGACTTGTGGTTTGAGATCCTCA 22837 Query 364139 ATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGT 364198 || |||| ||||| || || | ||| ||||||| || | |||||| || | Sbjct 22836 TGTCCCAGACCGAGACCGGCGTCCCTTTCATGCTGTACAAGGACGCCTGCAACAAGAAAT 22777 Query 364199 CCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAAT 364258 |||| ||| || | | ||||| || || ||| || || || |||||||| || | Sbjct 22776 CCAATCAGAAGAATTTGGGTACCATCAAGTGCTCCAATCTGTGCACGGAGATTATCGAGT 22717 Query 364259 ACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCT 364307 ||||| | || ||||| ||||| || ||||| || || ||||| || Sbjct 22716 ACACCTCCAAGGATGAGACCGCCGTCTGCAACCTCGCCTCCATCGCCCT 22668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303259817191712