Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 5e-14 >seq1 Length=157016 Score = 93.3 bits (102), Expect = 5e-14 Identities = 188/279 (67%), Gaps = 0/279 (0%) Strand=Plus/Plus Query 63043 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63102 ||||| || ||||| ||| || ||||| || || ||||| |||||||||||||||||||| Sbjct 22967 CATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAG 23026 Query 63103 AGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63162 || ||| ||||| | || | || ||||| || || || || || || || Sbjct 23027 GGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTTTCGCTTCAGGCGGAC 23086 Query 63163 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63222 |||| | | | || | |||||||| || | ||| | ||| | | || || || Sbjct 23087 GAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTT 23146 Query 63223 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63282 || ||||| || | ||| | ||||||||||| | || | | ||| || | | Sbjct 23147 ACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAG 23206 Query 63283 ACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCC 63321 ||| ||||| ||||| || || || | ||| || || || Sbjct 23207 ACCGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACC 23245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633587519033600