Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2451 223 6e-53 seq5243 176 8e-39 seq2033 176 8e-39 seq587 172 1e-37 seq1044 158 2e-33 seq170 147 4e-30 seq5492 129 1e-24 seq4129 125 1e-23 seq545 87.8 3e-12 seq429 87.8 3e-12 seq385 84.2 4e-11 >seq2451 Length=1853 Score = 223 bits (246), Expect = 6e-53 Identities = 594/896 (66%), Gaps = 30/896 (3%) Strand=Plus/Minus Query 9934 TCATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCT 9993 |||| || || |||||||||||||| ||| ||||| ||||||| ||| || Sbjct 1431 TCATCACACCAGCCTTCTGGTACTCACCAACCTTCTTATCGAAAAAGTTGGTCTTACCGG 1372 Query 9994 CGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAAC 10053 | |||||| | ||||||||||||||| |||||| || || | ||||| | || Sbjct 1371 TCAAGGAAATCATCTCCATGAAGTCAAAAGGGTTCGTCGCACCGTAGTGCTTCTCCTCAC 1312 Query 10054 CGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGT 10113 |||| | | | ||||| || || ||||| |||||||||||||||||||||| || Sbjct 1311 CGAGGGAAACAAGCAGACGGTCCGCAACAAACTCAATGTACTGGCTCATCAGGTCCGCGT 1252 Query 10114 TCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCG 10173 |||||||||||| ||| ||| | | ||||| ||||| ||||| ||| | || || | Sbjct 1251 TCATGCCAATCAGGCGCACGGGCAGCGACTCGCAGATGAACTCCTTCTCGATCGCAACAG 1192 Query 10174 CTTCCTCGACGATGCTCTTTACCACG---TCAAGGGACAGCTTGTTCTCGA----GCT-T 10225 | ||| || |||| || | |||| || ||| |||||||| || || ||| | Sbjct 1191 CGTCCGTGATGATG---TTCAGCACGCGTTCGCGGGGCAGCTTGTGCTTGATGTGGCTGT 1135 Query 10226 CGAATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTT 10285 | |||||||| |||| | | ||| || |||||||||||| |||| |||||| Sbjct 1134 TG--TACAGGAGGCAGGCAAAGTCCGTGTGCAGACCCTCGTCGCGGGAAATGAGCTCGTT 1077 Query 10286 GGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGA 10345 || ||| |||||||| | || || || ||||||||| ||||||||||| || Sbjct 1076 ACTGAACGTCAGGCCGGGCATCACACCGCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGA 1017 Query 10346 CCCGGAGAACAGAAGACCCTCCAC----GCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 |||||||| | | ||||||||| ||| | ||| | |||||||| |||| Sbjct 1016 GCCGGAGAAGAAGATACCCTCCACGGCAGCAAAACCA----ATCAGGCGCTCCTGGAAGC 961 Query 10402 AGCGGTCGCGCGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCG 10461 |||| | | | ||||||| | ||||| || | | ||||||| Sbjct 960 TCGCCTCGCTGCCGATCCAACGCACGGCCCACTCCGCCTTGTTCTGGATCGACGGGATCG 901 Query 10462 TCTCGATAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGA 10521 ||| ||| || | | ||||| |||| | ||| || | ||| || | Sbjct 900 TCTGGATCGCATGCAGCAGCTTCACCTTCTCGTCATTGTCGGAGATGTAGGTATCCAGCA 841 Query 10522 GCAGGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATAC 10581 ||| ||||| |||| ||||| | |||| | | |||| | |||||||| | Sbjct 840 GCACCGAGTAGGTCTCGGAGTGGATGTTCTCCATCATCAGCTGGAACCCGTAGAACGCGC 781 Query 10582 GTGCCGAGGGGTCCGTGACTTCCTCGGCA--AAGTTGTTGTTC-AGGTTCTCCATCACCA 10638 | ||| ||| | | || || || || ||| | || | |||||||| ||||| | Sbjct 780 GCGCCTCGGGAATCTTCACGTC--CGTCATGAAG-CGCTGAGCGAGGTTCTCAATCACGA 724 Query 10639 TGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGT 10698 |||| |||||||| ||||||||| | | | || |||||||||||| ||||| | || Sbjct 723 TGCCGTCGCTGCCAGCAAAGAAGGCCAACACGTACTTGATGAAGTGCTGCTCACCCTCCG 664 Query 10699 TCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGA 10758 |||| ||||| |||||| |||| || | || | | ||| |||| ||||||| Sbjct 663 TCAG--CTTCAC-CCAGTCAACCAGGTCGTTCCCCAGGTCAATCTCTTCCAACGTCCAGA 607 Query 10759 AAGTGGCAACGGCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAAC 10814 | | || ||||||| | | | |||||| ||||| |||| |||||| Sbjct 606 TGCAGCTCTCCTGCTCCTTGTACTTGCGCCAGATGTCGTGGTACTGGATCGGGAAC 551 >seq5243 Length=600 Score = 176 bits (194), Expect = 8e-39 Identities = 178/229 (78%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||||||||| | || | ||| || ||||||||||| |||||||| || || | | Sbjct 572 CCACCGCGAAGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCG 513 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| ||||| | || ||||| || || Sbjct 512 AGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 453 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTAC 68413 || ||||||||||| || ||||| ||||||||| |||||||||||| |||| || || Sbjct 452 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTC-GCTGGCCTCGAC 394 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | || |||||| || || ||||||||||| ||||| ||||||||| Sbjct 393 CTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCATT 345 >seq2033 Length=2245 Score = 176 bits (194), Expect = 8e-39 Identities = 178/229 (78%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||||||||| | || | ||| || ||||||||||| |||||||| || || | | Sbjct 434 CCACCGCGAAGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCG 375 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| ||||| | || ||||| || || Sbjct 374 AGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 315 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTAC 68413 || ||||||||||| || ||||| ||||||||| |||||||||||| |||| || || Sbjct 314 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTC-GCTGGCCTCGAC 256 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | || |||||| || || ||||||||||| ||||| ||||||||| Sbjct 255 CTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCATT 207 >seq587 Length=8987 Score = 172 bits (190), Expect = 1e-37 Identities = 177/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | || | ||| || |||||||| || |||||||| || |||| | Sbjct 1911 CCACCGCGCAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 1852 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| ||||| | || ||||| || || Sbjct 1851 AGGGTGCGGCCCTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 1792 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTAC 68413 || ||||||||||| || ||||| ||||||||| |||||||||||| |||| || || Sbjct 1791 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTC-GCTGGCCTCGAC 1733 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | || |||||| || || ||||||||||| ||||| ||||||||| Sbjct 1732 CTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCATT 1684 >seq1044 Length=4624 Score = 158 bits (174), Expect = 2e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | || | ||| || |||||||| || ||||| || || || | | Sbjct 939 CCACCGCGCAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGCG 880 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| ||||| | || ||||| || || Sbjct 879 AGGGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 820 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTAC 68413 || ||||||||||| || ||||| ||||||||| |||||||||||| |||| || || Sbjct 819 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTC-GCTGGCCTCGAC 761 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | || |||||| || || ||||||||||| || || ||||||||| Sbjct 760 CTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACAAAAATCTGCATT 712 >seq170 Length=23694 Score = 147 bits (162), Expect = 4e-30 Identities = 251/360 (70%), Gaps = 13/360 (4%) Strand=Plus/Minus Query 9934 TCATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCT 9993 |||| || || |||||||| ||||| ||| ||||| ||||||| ||| || Sbjct 365 TCATCACACCAGCCTTCTGATACTCACCAACCTTCTTTTCGAAAAAGTTGGTCTTACCGG 306 Query 9994 CGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAAC 10053 | |||||| | ||||||||||||||| |||||| || || | ||||| | || Sbjct 305 TCAAGGAAATCATCTCCATGAAGTCAAAAGGGTTCGTCGCACCGTAGTGCTTCTCCTCAC 246 Query 10054 CGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGT 10113 |||| | | | ||||| || || ||||| |||||||||||||||||||||| || Sbjct 245 CGAGGGAAACAAGCAGACGGTCCGCAACAAACTCAATGTACTGGCTCATCAGGTCCGCGT 186 Query 10114 TCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCG 10173 |||||||||||| ||| ||| | | ||||| ||||| ||||| ||| | || || | Sbjct 185 TCATGCCAATCAGGCGCACGGGCAGCGACTCGCAGATGAACTCCTTCTCGATCGCAACAG 126 Query 10174 CTTCCTCGACGATGCTCTTTACCACG---TCAAGGGACAGCTTGTTCTCGA----GCT-T 10225 | ||| || |||| || | |||| || ||| |||||||| || || ||| | Sbjct 125 CGTCCGTGATGATG---TTCAGCACGCGTTCGCGGGGCAGCTTGTGCTTGATGTGGCTGT 69 Query 10226 CGAATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTT 10285 | |||||||| |||| | | ||| || ||||| |||||| |||| |||||| Sbjct 68 TG--TACAGGAGGCAGGCAAAGTCCGTGTGCAGACCCTCATCGCGGGAAATGAGCTCGTT 11 >seq5492 Length=529 Score = 129 bits (142), Expect = 1e-24 Identities = 126/160 (79%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 || || || | |||||| || ||||| ||||| | || ||||| || || || |||||| Sbjct 505 CCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCC 446 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTACTTCCAAGGT 68422 ||||| || ||||| ||||||||| |||||||||||| |||| || || || | || Sbjct 445 TTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTC-GCTGGCCTCGACCTCGAGGGC 387 Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||||| || || ||||||||||| ||||| ||||||||| Sbjct 386 GATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCATT 347 >seq4129 Length=974 Score = 125 bits (138), Expect = 1e-23 Identities = 155/210 (74%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 268258 CCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCC 268317 |||||| | | ||| |||||| || || |||||||| || || | || ||| || Sbjct 229 CCACATGCCGTAGACGTAGTCCTTGGCGTGACCCCAATCACGAAGGGCATTCACGTTACC 170 Query 268318 GAGGAACAGGCATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGC--GAGTGATTTTT 268375 ||||| ||| |||||||||||| |||| | ||| || | |||| | ||||| ||| Sbjct 169 GAGGAGCAGCTGCTTCTGCTTGCCGTGCTTAATGCGGGC--GGCCGCACGGGTGATCTTT 112 Query 268376 CGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCAC 268435 | || ||||| |||| || || | ||| |||||||||||||| || ||||||||| Sbjct 111 CTCGTGACGAAGGTCTGTCCTCGACGGGGGGATTCGTGGTTGAAGAGAATACCGTTGCAC 52 Query 268436 GCGAACATGCCATATGCCTCACGGTAGTTC 268465 ||| ||||||| || | ||| ||||||||| Sbjct 51 GCGTACATGCCGTAGGACTCGCGGTAGTTC 22 >seq545 Length=9676 Score = 87.8 bits (96), Expect = 3e-12 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 84463 TAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCAC 84520 |||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct 4052 TAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGTCGTGGGTTCGATCCCCAC 3995 >seq429 Length=12153 Score = 87.8 bits (96), Expect = 3e-12 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 84463 TAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCAC 84520 |||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct 8846 TAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGTCGTGGGTTCGATCCCCAC 8789 >seq385 Length=13308 Score = 84.2 bits (92), Expect = 4e-11 Identities = 102/137 (74%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 268610 CCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCAC--GTCCGCTG 268667 |||||| ||||| || ||||| | || || || || |||||||| ||||| || Sbjct 13282 CCGCAGGAGCGGATCGCATCGAGGATCTTGAGCGTGCCGATACCATCCACTTGTCCGGTG 13223 Query 268668 TATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCT 268727 || || ||| ||||||| ||||||| || ||| ||||||| | ||||| || |||| Sbjct 13222 TAG--TCGGGCGTCTCGAAGGACACCTTCACGTGGGACTGGGCGGCGAGGTTGTACACCT 13165 Query 268728 CATCCGGTTTGACCTGC 268744 ||||||| || |||||| Sbjct 13164 CATCCGGCTTCACCTGC 13148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921557702107520