Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2451 334 1e-86 seq1 271 1e-67 seq170 167 4e-36 >seq2451 Length=1853 Score = 334 bits (370), Expect = 1e-86 Identities = 603/869 (69%), Gaps = 17/869 (2%) Strand=Plus/Plus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| || |||| ||||||||| || ||||||| || | || || || |||||| Sbjct 557 GATCCAGTACCACGACATCTGGCGCAAGTACAAGGAGCAGGAGAGCTGCATCTGGACGTT 616 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA 42403 || ||||||||||||| || ||| || | ||||| | ||| | ||| || | Sbjct 617 GGAAGAGATTGACCTGGGGAACGACCTGGTTGACTGGGTGAAGCTGACGGAGGGTGAGCA 676 Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463 | ||| |||| || | |||||||||| || | | |||||||| || | |||||| Sbjct 677 GCACTTCATCAAGTACGTGTTGGCCTTCTTTGCTGGCAGCGACGGCATCGTGATTGAGAA 736 Query 42464 CCTGGC-CACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCT 42522 ||| || || | | ||||||| || ||| || ||||||||| |||||||| | Sbjct 737 CCTCGCTCAGC-GCTTCATGACGGACGTGAAGATTCCCGAGGCGCGCGCGTTCTACGGGT 795 Query 42523 TCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACA 42582 ||||| | || |||||| | ||||| ||| ||| | ||||| | || |||| Sbjct 796 TCCAGCTGATGATGGAGAACATCCACTCCGAGACCTACTCGGTGCTGCTGGATACCTACA 855 Query 42583 TCCTGGATCCCGTCGAGC--GTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCAT 42640 || || | |||| || | | ||| | | || || ||||||| || | || Sbjct 856 TCTCCGACAATGACGAGAAGGTGAAG--CTGCTGCATGCGATCCAGACGATCCCGTCGAT 913 Query 42641 CAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGA 42700 | |||| |||||||| ||||| | ||||||| || ||| || | ||| || Sbjct 914 CCAGAACAAGGCGGAGTGGGCCGTGCGTTGGATCGGCAG---CGAGGCGAGCTTCCAGGA 970 Query 42701 GAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCAT 42760 | | ||| | | ||| | ||||| ||||| ||||||||||| ||| ||||| | |||| Sbjct 971 GCGCCTGATTGGTTTTGCTGCCGTGGAGGGTATCTTCTTCTCCGGCTCCTTCTGCGCCAT 1030 Query 42761 CTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCA 42819 ||||||||| ||| || ||||| ||||||||| || || ||| ||||| ||||| Sbjct 1031 CTTCTGGCTGAAGAAGCGCGGTGT-GATGCCCGGCCTGACGTTCAGTAACGAGCTCATTT 1089 Query 42820 GCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGC 42879 | | |||||||| ||||| | |||||||||||||||||||| | |||||| ||| || Sbjct 1090 CCCGCGACGAGGGTCTGCACACGGACTTTGCCTGCCTCCTGTACAACAGCCACATCAAGC 1149 Query 42880 ACAAGC--CCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAA 42937 |||||| || || || || || | | |||||||||||| || || | ||||||||| Sbjct 1150 ACAAGCTGCCCCG--CGAACGCGTGCTGAACATCATCACGGACGCTGTTGCGATCGAGAA 1207 Query 42938 GGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTG 42997 ||||||| || |||||||||||||| |||| | ||||||||| ||||| ||| | Sbjct 1208 GGAGTTCATCTGCGAGTCGCTGCCCGTGCGCCTGATTGGCATGAACGCGGACCTGATGAG 1267 Query 42998 CAAGTACATCCAGTACGTCGCCGACCATCT-CCTGTGCCAGATGGGTCTCAGCCGCCTCT 43056 | ||||||| ||| || || |||| ||| | ||| | || || | | || Sbjct 1268 CCAGTACATTGAGTTTGTTGCGGACCGTCTGCTTGTTTCCCTCGGTGAGGAGAAG-CACT 1326 Query 43057 ACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACT 43116 || || || ||| || ||||| ||||||| || || ||| || |||||||||| Sbjct 1327 ACGGTGCGACGAACCCTTTTGACTTCATGGAGATGATTTCCTTGACCGGTAAGACCAACT 1386 Query 43117 TTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||| ||| || | || |||||| Sbjct 1387 TTTTCGATAAGAAGGTTGGTGAGTACCAG 1415 >seq1 Length=157016 Score = 271 bits (300), Expect = 1e-67 Identities = 1084/1685 (64%), Gaps = 76/1685 (5%) Strand=Plus/Plus Query 243776 AGGTAGTACATGCCGGTCTTGAGTCCA--CTGGACCAGGCGTGGAGGTGCATGGCCGTCA 243833 |||||||||||||| ||||| |||||| ||| |||| ||||| |||||||| || | Sbjct 21798 AGGTAGTACATGCCCGTCTTCAGTCCAGACTG--CCAGCAGTGGAAGTGCATGGAGGTGA 21855 Query 243834 GCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCT 243893 | | | ||| || || ||| || ||||||| | |||||| || Sbjct 21856 -----TACGGCCGGAGGAGGGGCTC----TCG---AGGTAGAGGTTCATGGACTGCGACT 21903 Query 243894 GGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCAT 243953 |||| | | || || | |||||||| ||| || | ||| || ||||| Sbjct 21904 GGTCAATATACTTGGCGCGGGCCGCGGCCATATCGATCAGCTGACGCTGGGAGATCTCCC 21963 Query 243954 ACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGC-ACCGAG 244012 || | || ||||| ||||| || ||||||| || | | | || || ||| Sbjct 21964 ACACGGTGCGGTAGAGCTCCTTGATGTCGTCGGGGATACCCGCCACAC-CAGCGACGGAG 22022 Query 244013 CCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCA-- 244070 || ||| | ||||| | | | || || | ||||||||||||| ||||| | Sbjct 22023 CCGTTGAAGGTGATGATTTCGTTACGGATCTCATCGTTCCACAGGTT---GCGCTTGATG 22079 Query 244071 -GCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGG 244129 | || || || | | ||||||||||| | ||||| || |||||| || || | Sbjct 22080 AGGTCCATCACGAGATACTTGTTCACCACCGGGAACTCACCGCTCAGCACACGACGGACG 22139 Query 244130 TAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTC 244189 || | ||| ||| ||||||| || ||| |||| ||||| ||||| | ||| Sbjct 22140 TAAATGTTCGACGTGAAGGGCTCGAAGCACTCGTTGTTACCCAGAATCTGAGAGGTGGAG 22199 Query 244190 GCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGT 244249 || || |||||||||| || || || ||| | || || | | | || || Sbjct 22200 GCGGTGGGCATGGGCGCCAGGAGGAGGGAGTTACGCAACCCCTTCTCCATGACACGCTTC 22259 Query 244250 CTGAGCTCGTTCCAGTCCCACATGCC-CGAGAGGTCCTCGCGTTTGAGGCCCCACATGTC 244308 |||| | | ||||| ||| ||| | | || | |||| |||| | ||| Sbjct 22260 TTGAGGGCATCCCAGTTCCAGCGGCCGCTCGTGGGCT----GTTTCT---CCCATAAGTC 22312 Query 244309 AAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCG 244368 ||||||||| ||||| | | |||||||||| | ||||| |||||||| || Sbjct 22313 GAACTGCAGCTTCCCCTCCGAGGCAGGGCTGCCCTTGAAGGTCTCATAGGGACCCTCCAC 22372 Query 244369 CTGGGCCAGCT---TACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCAT 244425 || || || | | || ||| | ||||||||||||||||||||||||||| Sbjct 22373 CTCCGCGAGGTCCGTGGAGGACTCCACC---GCGGCGTAGTAGATGGTCTCGAAGATCTC 22429 Query 244426 CTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTC 244485 || || | | | |||| ||| |||||||||| | | | || ||| | || Sbjct 22430 CTCATTGAGCTTCTGCGCCTCCTCGCTCGTGAAGGGGAGACGGAGGAGAATAAAGGCATC 22489 Query 244486 GGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGC--- 244542 ||| || ||||||||||| | |||||| || | ||| |||| |||| | | |||| Sbjct 22490 GGCTAGCCCCTGCACGCCAAGGCCGATCGGGCGGTGGCGCTCGTTGCTCCTCTTGGCAGT 22549 Query 244543 TTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCG 244602 ||| ||||||||| | ||| ||| || || ||| |||||| || | | | | Sbjct 22550 TTC---CACGGGGTAGTAACTGCGGTCAATGACGCGGTTCAGGTTGTACGTAA-CGTCCT 22605 Query 244603 -GACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCC 244661 | ||| || || | || |||| || | | ||| || ||| Sbjct 22606 TGGTGACCTCATAGAGGCGTTGGTGGTCGAACACCTGCTTCTCCACGTCGA--------- 22656 Query 244662 TCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGG 244721 |||||| | ||||||||| | ||| |||||||||||||| ||| ||| | || Sbjct 22657 ---CAAACTTGCTGAGGGCGATGGAGGCGAGGTTGCAGACGGCGGTCTCATCCTTGGAGG 22713 Query 244722 TGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGAT 244781 |||||| || |||||| ||||| || || |||||||||||| |||| | || |||| Sbjct 22714 TGTACTCGATAATCTCCGTGCACAGATTGGAGCACTTGATGGTACCCAAATTCTTCTGAT 22773 Query 244782 TGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGG 244841 |||| || |||||||||||||||||| |||||||| || | ||||||||| ||||| Sbjct 22774 TGGATTTCTTGTTGCAGGCGTCCTTGTACAGCATGAAAGGGACGCCGGTCTCGGTCTGGG 22833 Query 244842 CGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTG-CGAGCCTTGCCCTCT 244900 | ||||| ||| | |||| ||| | |||| || || | || || ||| Sbjct 22834 ACATGAGGATCTCAAACCACAAGTCCTGCGCCGGAATCGTCTTGACGCCCATTCCCTTCT 22893 Query 244901 GCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGG 244960 ||||| |||| ||||||||| ||| || ||| ||||| | | Sbjct 22894 -TTTCGTACTCCTCGTACTTCCGCTCGAACTCCTCGCCGTAGCAGTCGCTCAGGCCTGTG 22952 Query 244961 CACGACG-CCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAG 245019 ||| ||| ||| ||| || |||||| || | |||||||| | || ||||||||| Sbjct 22953 CAC-ACGTTGGGGTCCATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAG 23011 Query 245020 GTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTT 245079 || || ||||| ||||| | || || || | || | || || ||| || ||||| Sbjct 23012 ATCAGGAATCCAAAGGGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTT 23071 Query 245080 CTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAG 245139 | |||| | || || || |||||| ||||||| ||||| | ||| || |||| Sbjct 23072 TCGCTTCAGGCGGACGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAA 23131 Query 245140 GGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG----CGTTGAAGA 245195 ||| || ||||| ||| |||||||||| | | || ||| ||||| | Sbjct 23132 GGCACCCTTACGCTTACCGCCACCCTGGTCCA----CGTAGCGGGCGGTGTTATTGAACA 23187 Query 245196 TGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCT 245255 || || | ||||| | ||||| ||| ||||| || || |||||| || Sbjct 23188 CACGGAGCATGGGCACGAGACCGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACCGG 23247 Query 245256 TGCCCCTGAGGTTGCTGA---TGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGG 245312 | || |||| ||| ||| | || | || ||||| ||| |||| || Sbjct 23248 AAGAGCGGATGTTG-TGAACGTGG--AACCCAATACCACCGGCCGCCTTACTGATGGTGG 23304 Query 245313 CGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAA 245372 |||| ||||| |||||| ||||| || || ||||| ||||||| | || | Sbjct 23305 CGCACTCCTTGAGGGTGTCGTAAATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGA 23364 Query 245373 AGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGG 245432 ||||||| || ||| ||||| ||| | | | ||||||||| || ||| ||||||||| Sbjct 23365 AGCAGGAACTCATCTGAGGCTTCGGGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGG 23424 Query 245433 TAAAG 245437 ||||| Sbjct 23425 TAAAG 23429 >seq170 Length=23694 Score = 167 bits (184), Expect = 4e-36 Identities = 234/324 (72%), Gaps = 6/324 (2%) Strand=Plus/Plus Query 42807 AACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCG 42866 ||||| ||||| | | || ||||| ||||| | |||||||||||||||||||| | Sbjct 11 AACGAGCTCATTTCCCGCGATGAGGGTCTGCACACGGACTTTGCCTGCCTCCTGTACAAC 70 Query 42867 AGCCACCTCAGGCACAAGC--CCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCG 42924 |||||| ||| |||||||| || || || || || | | |||||||||||| || | Sbjct 71 AGCCACATCAAGCACAAGCTGCCCCG--CGAACGCGTGCTGAACATCATCACGGACGCTG 128 Query 42925 TGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACC 42984 | | |||||||||||||||| || |||||||||||||| |||| | ||||||||| Sbjct 129 TTGCGATCGAGAAGGAGTTCATCTGCGAGTCGCTGCCCGTGCGCCTGATTGGCATGAACG 188 Query 42985 ACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCT-CCTGTGCCAGATGGGT 43043 ||||| ||| || ||||||| ||| || || |||| ||| | ||| | || Sbjct 189 CGGACCTGATGAGCCAGTACATTGAGTTTGTTGCGGACCGTCTGCTTGTTTCCCTCGGTG 248 Query 43044 CTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAG 43103 || | | |||| || || ||| || ||||| ||||||| || || ||| Sbjct 249 AGGAGAAG-CACTACGGTGCGACGAACCCTTTTGACTTCATGGAGATGATTTCCTTGACC 307 Query 43104 GGCAAGACCAACTTTTTCGAGAAG 43127 || ||||||||||||||||| ||| Sbjct 308 GGTAAGACCAACTTTTTCGAAAAG 331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944272907388160