Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq5372 122 9e-23 seq4373 122 9e-23 seq1880 122 9e-23 seq4543 120 3e-22 seq3993 120 3e-22 seq1044 109 6e-19 seq587 105 7e-18 seq5243 100 3e-16 seq2033 100 3e-16 seq5492 91.5 2e-13 >seq5372 Length=561 Score = 122 bits (134), Expect = 9e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || |||||||| |||||||| Sbjct 80 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 139 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 140 AATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 199 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||||||||| ||||| |||| | || || ||||| || |||||||| || Sbjct 200 CTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCAC 259 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 260 GAAGATCTGCAT 271 Score = 122 bits (134), Expect = 9e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || |||||||| |||||||| Sbjct 308 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 367 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 368 AATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 427 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||||||||| ||||| |||| | || || ||||| || |||||||| || Sbjct 428 CTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCAC 487 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 488 GAAGATCTGCAT 499 >seq4373 Length=891 Score = 122 bits (134), Expect = 9e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || |||||||| |||||||| Sbjct 681 CTCCTTCTGGATGTTGTAGTCCGCAAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 740 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 741 AATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 800 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||||||||| ||||| |||| | || || ||||| || |||||||| || Sbjct 801 CTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCAC 860 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 861 GAAGATCTGCAT 872 >seq1880 Length=2433 Score = 122 bits (134), Expect = 9e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || |||||||| |||||||| Sbjct 2238 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 2297 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 2298 AATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 2357 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||||||||| ||||| |||| | || || ||||| || |||||||| || Sbjct 2358 CTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCAC 2417 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 2418 GAAGATCTGCAT 2429 >seq4543 Length=829 Score = 120 bits (132), Expect = 3e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || |||||||| |||||||| Sbjct 639 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 698 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 699 AATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 758 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||||||||| ||||| |||| | || || ||||| || |||||||| || Sbjct 759 CTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCAC 818 Query 42197 AAAGATTTGCA 42207 ||||| |||| Sbjct 819 GAAGATCTGCA 829 >seq3993 Length=1029 Score = 120 bits (132), Expect = 3e-22 Identities = 144/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || |||||||| |||||||| Sbjct 94 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 153 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 154 AATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 213 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||||||||| ||||| |||| | || || ||||| |||| ||||| || Sbjct 214 CTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTTAAAGTCTTCAC 273 Query 42197 AAAGATTTGCATTTTC 42212 ||| || ||||| ||| Sbjct 274 AAAAATCTGCATGTTC 289 >seq1044 Length=4624 Score = 109 bits (120), Expect = 6e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || |||||||| || || || || || | || || |||||||| |||||||| Sbjct 904 CTCCTTCTGGATATTGTAGTCCGCGAGGGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 845 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | ||||||||| ||| || |||| | Sbjct 844 GATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 785 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||||| | || || |||| | |||||| || || || || ||||| || Sbjct 784 CTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCAC 725 Query 42197 AAAGATTTGCATT 42209 ||| || |||||| Sbjct 724 AAAAATCTGCATT 712 >seq587 Length=8987 Score = 105 bits (116), Expect = 7e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || ||||||||||||||||| Sbjct 1876 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTCCAGCTGCTTACCAGCGAA 1817 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | ||||||||| ||| || |||| | Sbjct 1816 GATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 1757 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||||| | || || |||| | |||||| || || || || ||||| || Sbjct 1756 CTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCAC 1697 Query 42197 AAAGATTTGCATT 42209 || || |||||| Sbjct 1696 GAAAATCTGCATT 1684 >seq5243 Length=600 Score = 100 bits (110), Expect = 3e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || || ||||| || || || || || | || || ||||||||||||||||| Sbjct 537 CTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAA 478 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | ||||||||| ||| || |||| | Sbjct 477 GATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 418 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||||| | || || |||| | |||||| || || || || ||||| || Sbjct 417 CTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCAC 358 Query 42197 AAAGATTTGCATT 42209 || || |||||| Sbjct 357 GAAAATCTGCATT 345 >seq2033 Length=2245 Score = 100 bits (110), Expect = 3e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || || ||||| || || || || || | || || ||||||||||||||||| Sbjct 399 CTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAA 340 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | ||||||||| ||| || |||| | Sbjct 339 GATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 280 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||||| | || || |||| | |||||| || || || || ||||| || Sbjct 279 CTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCAC 220 Query 42197 AAAGATTTGCATT 42209 || || |||||| Sbjct 219 GAAAATCTGCATT 207 >seq5492 Length=529 Score = 91.5 bits (100), Expect = 2e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 42027 ATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGC 42086 || ||||| || || | || || | || || ||||||||||||||||| ||||| ||| Sbjct 529 ATGTTGTAGTCCGCAGGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGC 470 Query 42087 TGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTG 42146 |||||||| | || | | ||||||||| ||| || |||| || | | ||| Sbjct 469 TGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTG 410 Query 42147 TCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGC 42206 ||||| | || || |||| | |||||| || || || || ||||| || || || ||| Sbjct 409 TCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGC 350 Query 42207 ATT 42209 ||| Sbjct 349 ATT 347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543174666461440