Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1 214 2e-50 >seq1 Length=157016 Score = 214 bits (236), Expect = 2e-50 Identities = 307/430 (71%), Gaps = 2/430 (0%) Strand=Plus/Minus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 |||||||| |||||||||||||| || |||||| ||| |||||| ||| || ||||| Sbjct 23419 GCCACCCCTACCCTGTTCAACGCCGGTACCCCGAAGCCTCAGATGAGTTCCTGCTTCCTC 23360 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 || | | |||| |||| ||| || |||| ||||| ||||||||| || || ||| Sbjct 23359 GTGGCCATGAAGGACGACAGTATCGATGGCATTTACGACACCCTCAAGGAGTGCGCCACC 23300 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||| || || || || || ||| || || ||| || | || | ||| Sbjct 23299 ATCAGTAAGGCGGCCGGTGGTATTGGGTTCCACGTTCACAACATCCGCTCTTCCGGTAGT 23240 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 |||||| |||||| || || ||||||||||| ||||| || |||||||| || ||||| Sbjct 23239 TACATCGCCGGTACGAACGGTACCTCCAACGGTCTCGTGCCCATGCTCCGTGTGTTCAAT 23180 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || |||||||||||||||||||| || | | | |||||| | ||||| || || Sbjct 23179 AACACCGCCCGCTACGTGGACCAGGGTGGCGGTAAGCGTAAGGGTGCCTTCGCCGTGTAC 23120 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCA-CGGCAA 94250 |||||||| |||||||| |||||| | ||| || |||| | ||| || ||| || Sbjct 23119 CTCGAGCCGTGGCACGCCGACGTGTTCGAGTTCGTCCGCCTG-AAGCGAAACACCGGTAA 23061 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || | | ||| | || || || ||||| || ||| | || || || || ||||| Sbjct 23060 GGAGGACCAACGTGCCCGCGATCTGTTTTACGCCCTTTGGATTCCTGATCTCTTCATGAA 23001 Query 94311 ACGCGTCGAG 94320 || ||| || Sbjct 23000 GCGTGTCAAG 22991 Score = 102 bits (112), Expect = 8e-17 Identities = 193/284 (68%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| | || || |||| ||||||||||| |||||||| | ||||| || || |||||| Sbjct 22231 AACTCCCTCCTCCTGGCGCCCATGCCCACCGCCTCCACCTCTCAGATTCTGGGTAACAAC 22172 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208 |||| ||||| |||||||| || ||| | ||| | | || ||||| ||| || ||| Sbjct 22171 GAGTGCTTCGAGCCCTTCACGTCGAACATTTACGTCCGTCGTGTGCTGAGCGGTGAGTTC 22112 Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAG 95268 || || | |||||| | ||| | |||||| | | ||||| || || Sbjct 22111 CCGGTGGTGAACAAGTATCTCGTGATGGACCTCATCAAGCGCAACCTGTGGAACGATGAG 22052 Query 95269 GTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAG 95328 || ||| || | | | ||||||||||||| | || || || || Sbjct 22051 ATCCGTAACGAAATCATCACCTTCAACGGCTCCGTCGCTGGTGTGGCGGGTATCCCCGAC 21992 Query 95329 GACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 |||||||||| ||||||| ||||||||||||||| | ||||| Sbjct 21991 GACATCAAGGAGCTCTACCGCACCGTGTGGGAGATCTCCCAGCG 21948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494688470431360