Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1 174 2e-38 seq2451 168 7e-37 seq170 136 4e-27 seq587 98.7 1e-15 seq5243 93.3 4e-14 seq2033 93.3 4e-14 seq1044 89.7 5e-13 seq5492 86.0 6e-12 >seq1 Length=157016 Score = 174 bits (192), Expect = 2e-38 Identities = 386/569 (68%), Gaps = 25/569 (4%) Strand=Plus/Plus Query 153596 GGCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTC 153655 ||| || || || || || |||||||| ||||| || | | |||||| | ||||| Sbjct 22670 GGCGATGGAGGCGAGGTTGCAGACGGCGGTCTCATCCTTGGAGGTGTACTCGATAATCTC 22729 Query 153656 GGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCA 153715 | ||| || ||| ||| || ||| |||||||| | ||||||| ||| ||||| Sbjct 22730 CGTGCACAGATTGGAGCACTTGATGGTACCCAAATTCTTCTGATTGGATTTCTTGTTGCA 22789 Query 153716 CGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAA 153772 ||||| ||| | |||||| | || ||||||||||| || | || ||| ||| Sbjct 22790 GGCGTCCTTGTACAGCATGAAAGGGACGCCGGTCTCGGTCTGGGACATGAGGATCTCAAA 22849 Query 153773 CCTATGCAGGTCCTGCGCTCGCACCCGCT----GCCGATAGCGGCCCTCGCTCTCGTATC 153828 || || ||||||||| | | | || ||| || |||| | ||||| Sbjct 22850 CCA---CAAGTCCTGCGCCGGAATCGTCTTGACGCCCATT----CCCTTCTTTTCGTACT 22902 Query 153829 GCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACAC-TGATGC 153887 ||||||| ||||| ||||| ||||||||||||||| ||||| | ||| | || Sbjct 22903 CCTCGTACTTCCGCTCGAACTCCTCGCCGTAGCAGTCGCTCAGGCCTGTGCACACGTTGG 22962 Query 153888 GGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACC 153947 || | |||||||| |||| | || | ||||| || |||||| ||||| || | | Sbjct 22963 GGTC-CATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATC 23021 Query 153948 CAGAGCGCGTACATGAGGTCGC--GCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCA 154005 || || ||||| | || |||| || | ||| |||||| || |||| || |||| Sbjct 23022 CAAAGGGCGTAAAACAGATCGCGGGCACGTTG--GTCCTCCTTACCGGTGTTTCGCTTCA 23079 Query 154006 GATTGA-GCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCT 154064 | || | || | | | | |||||||||||| || || | ||| ||||| | |||||| Sbjct 23080 GGCGGACGAACTCGA-ACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCC 23138 Query 154065 TTACGCTTTCCG---CCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATG 154121 |||||||| ||| ||||| || |||| ||| | | || ||||| || || | |||| Sbjct 23139 TTACGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATG 23198 Query 154122 GGTTCCAGGCCGCTTGCGGTGCCGTTGGT 154150 || | || ||| | | ||| ||||| || Sbjct 23199 GGCACGAGACCGTTGGAGGTACCGTTCGT 23227 >seq2451 Length=1853 Score = 168 bits (186), Expect = 7e-37 Identities = 367/538 (68%), Gaps = 11/538 (2%) Strand=Plus/Plus Query 52304 GCTGCTGAATGCGTTCGAGCACG-TGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGA 52362 ||||||| ||||| || || ||| | |||| | | || ||||| ||||||| || Sbjct 881 GCTGCTGCATGCGATCCAG-ACGATCCCGTCGATCCAGAACAAGGCGGAGTGGGCCGTGC 939 Query 52363 AGTGGATCGAGAGCGACACCGCCACGCTGGCCG-AGCGCATGGTGGCCTTCGCCATAGTC 52421 ||||||| ||||| || | ||| | | ||||| || | | || || || Sbjct 940 GTTGGATCGGCAGCGAG---GCGA-GCTTCCAGGAGCGCCTGATTGGTTTTGCTGCCGTG 995 Query 52422 GAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATA 52481 ||||| | || || |||||| ||| ||||||||| | | || | | || | Sbjct 996 GAGGGTATCTTCTTCTCCGGCTCCTTCTGCGCCATCTTCTGGCTGAAGAAGCGCGGTGTG 1055 Query 52482 ATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGAC 52541 |||||||||||||||||||| |||||| | || || |||||||| || |||||||||||| Sbjct 1056 ATGCCCGGCCTGACGTTCAGTAACGAGCTCATTTCCCGCGACGAGGGTCTGCACACGGAC 1115 Query 52542 TTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTG-GATTCGGACACGATCCT 52600 ||||| |||||| ||||| | | | | | | || || || || || | || Sbjct 1116 TTTGCCTGCCTCCTGTACAACAGCCACATCAAGCACAAGCTGCCCCGCGAACGCG-TGCT 1174 Query 52601 GAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGT 52660 || ||| ||| ||| || || || ||||| |||||||| | | ||||||| || Sbjct 1175 GAACATCATCACGGACGCTGTTGCGATCGAGAAGGAGTTCATCTGCGAGTCGCTGCCCGT 1234 Query 52661 CGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCG 52720 ||| | |||||||||||| | ||| || ||||||| |||||||| ||||| || Sbjct 1235 GCGCCTGATTGGCATGAACGCGGACCTGATGAGCCAGTACATTGAGTTTGTTGCGGACCG 1294 Query 52721 TCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTAT 52780 |||| | || ||||| || ||| ||| | || || || ||||| || || Sbjct 1295 TCTGCTTGTTTCCCTCGGTGAGGAGAAGCACTACGGTGCGACGAACCCTTTTGACTTCAT 1354 Query 52781 GAACAACATTTCGCTTGA-GGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 | | | ||||| ||||| || ||||||||||||||||| ||| || || ||||| Sbjct 1355 GGAGATGATTTC-CTTGACCGGTAAGACCAACTTTTTCGATAAGAAGGTTGGTGAGTA 1411 >seq170 Length=23694 Score = 136 bits (150), Expect = 4e-27 Identities = 244/351 (70%), Gaps = 4/351 (1%) Strand=Plus/Plus Query 52493 GACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT 52552 ||||||||| |||||| | || || ||||| || || ||||||||||||||||| ||||| Sbjct 1 GACGTTCAGTAACGAGCTCATTTCCCGCGATGAGGGTCTGCACACGGACTTTGCCTGCCT 60 Query 52553 CTACTACAAGACGCGCGTGACCGAAAAATTGGATT-CGGACACGATCCTGAGCATGTTCA 52611 | ||||| | | | | | | || || || || || | |||| ||| ||| Sbjct 61 CCTGTACAACAGCCACATCAAGCACAAGCTGCCCCGCGAACGCG-TGCTGAACATCATCA 119 Query 52612 AGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGG 52671 ||| || || || ||||| |||||||| | | ||||||| || ||| | | Sbjct 120 CGGACGCTGTTGCGATCGAGAAGGAGTTCATCTGCGAGTCGCTGCCCGTGCGCCTGATTG 179 Query 52672 GCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGC 52731 ||||||||||| | ||| || ||||||| |||||||| ||||| |||||| | || Sbjct 180 GCATGAACGCGGACCTGATGAGCCAGTACATTGAGTTTGTTGCGGACCGTCTGCTTGTTT 239 Query 52732 AGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTT 52791 ||||| || ||| ||| | || || || ||||| || ||| | | |||| Sbjct 240 CCCTCGGTGAGGAGAAGCACTACGGTGCGACGAACCCTTTTGACTTCATGGAGATGATTT 299 Query 52792 CGCTTGA-GGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTATAAG 52841 | ||||| || ||||||||||||||||| ||| || || |||||| || Sbjct 300 C-CTTGACCGGTAAGACCAACTTTTTCGAAAAGAAGGTTGGTGAGTATCAG 349 >seq587 Length=8987 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || ||||| || || ||||| | Sbjct 1878 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTCCAGCTGCTTACCAGCG 1819 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| |||||||| || |||||||| ||||| ||| || || | Sbjct 1818 AAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACG 1759 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | | ||| ||||||| | | || ||||| || || || || Sbjct 1758 TTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTC 1699 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 1698 ACGAAAATCTGCAT 1685 >seq5243 Length=600 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || || ||||||||||| | || || |||||||| || ||||| | Sbjct 539 GACTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCG 480 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| |||||||| || |||||||| ||||| ||| || || | Sbjct 479 AAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACG 420 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | | ||| ||||||| | | || ||||| || || || || Sbjct 419 TTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTC 360 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 359 ACGAAAATCTGCAT 346 >seq2033 Length=2245 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || || ||||||||||| | || || |||||||| || ||||| | Sbjct 401 GACTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCG 342 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| |||||||| || |||||||| ||||| ||| || || | Sbjct 341 AAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACG 282 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | | ||| ||||||| | | || ||||| || || || || Sbjct 281 TTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTC 222 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 221 ACGAAAATCTGCAT 208 >seq1044 Length=4624 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || || |||||||| | || || ||||| || || || || | Sbjct 906 GACTCCTTCTGGATATTGTAGTCCGCGAGGGTGCGGCCCTCCTCCAGCTGCTTGCCAGCG 847 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| |||||||| || |||||||| ||||| ||| || || | Sbjct 846 AAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACG 787 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | | ||| ||||||| | | || ||||| || || || || Sbjct 786 TTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTC 727 Query 138601 ACAAAAATCTGCAT 138614 |||||||||||||| Sbjct 726 ACAAAAATCTGCAT 713 >seq5492 Length=529 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 |||||||| || ||||| | |||| |||||||| |||||||| || |||||||| ||| Sbjct 502 TCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTG 443 Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 || ||| || || | | || | ||||||| | | ||| ||||||| | | Sbjct 442 TCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATG 383 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || ||||| || || || || || ||||||||||| Sbjct 382 GTCTTACCGGTGAGGGTCTTCACGAAAATCTGCAT 348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496227562379520