Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1 161 9e-35 seq2451 122 8e-23 seq3993 114 1e-20 seq5372 109 5e-19 seq1880 109 5e-19 seq4543 107 2e-18 seq1044 107 2e-18 seq4373 105 6e-18 seq5243 104 2e-17 seq2033 104 2e-17 seq587 104 2e-17 seq5492 86.0 6e-12 >seq1 Length=157016 Score = 161 bits (178), Expect = 9e-35 Identities = 382/567 (67%), Gaps = 15/567 (3%) Strand=Plus/Plus Query 146614 ACGTTGACGCACTTGTTGACGGCGATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTG 146673 |||| ||| ||||| ||| |||||| ||||| | ||| || ||||| ||||| |||||| Sbjct 22650 ACGTCGACAAACTTGCTGAGGGCGATGGAGGCGAGGTTGCAGACGGCGGTCTCATCCTTG 22709 Query 146674 TCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttt 146733 | |||| | |||||| | ||| || ||| |||||||||| | |||||||| || Sbjct 22710 GAGGTGTACTCGATAATCTCCGTGCACAGATTGGAGCACTTGATGGTACCCAAATTCTTC 22769 Query 146734 tGGTTACTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTCGACA 146793 || || ||||||||||| ||||||||| |||||| | || | ||||| ||| Sbjct 22770 TGATTGGATTTCTTGTTGCAGGCGTCCTTGTACAGCATGAAAGGGACGCCGGTCTCGGTC 22829 Query 146794 TTGGTCTCGACGATGAATCTAA--ACAAATCTCTGGCCTTTACTTGTCTT-TCGTACAGT 146850 | || | || ||| || || |||| || ||| | | | ||||| || || | Sbjct 22830 TGGGACATGAGGAT--CTCAAACCACAAGTC-CTGCGCCGGAATCGTCTTGACGCCCATT 22886 Query 146851 TTATTCTTTTCGTATTTCTCGTACAATATTTCAAA--ACTAGAACCGTACTCGTCGAGGA 146908 ||||||||||| | ||||||| || || || | ||||| |||| | Sbjct 22887 CCCTTCTTTTCGTACTCCTCGTACTTCCGCTCGAACTCCTCG--CCGTAGCAGTCGCTCA 22944 Query 146909 GGCCGGGATACTTTTTGGGACAGAACAGCGACCATTCTTTATTCTCCTTCACGCGTTCCA 146968 |||| | || ||||| | ||||| ||| | | | |||||| || || | || Sbjct 22945 GGCCTGTGCACACGTTGGGGTCCATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCA 23004 Query 146969 TAAACAAATCGGGAATCCAAAGGCCCAGCATCAAGTCGCGAGC-CTTGGCGTCCTCGGAG 147027 | || | ||| |||||||||||| | | || ||||| || | | | |||||| Sbjct 23005 TGAAGAGATCAGGAATCCAAAGGGCGTAAAACAGATCGCGGGCACGTTG-GTCCTCCTTA 23063 Query 147028 CCCATGTTGCGTCTCAAGTTGAGGACATCGTAAATTTCCGGATGCCAAGGCTCCACGTAT 147087 || |||| || ||| | || || ||| | | || | ||||| ||||| | ||| Sbjct 23064 CCGGTGTTTCGCTTCAGGCGGACGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTAC 23123 Query 147088 GCGGCGAGTGCGCCTTTTCGCTTACCG---CCCTGATCGACGTGGCGCACCATGTTATTG 147144 |||||| || || || ||||||||| ||||| || |||| ||| | |||||||| Sbjct 23124 ACGGCGAAGGCACCCTTACGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTG 23183 Query 147145 AAGACTCGTAACATGGACACGAGGCCG 147171 || || || | ||||| |||||| ||| Sbjct 23184 AACACACGGAGCATGGGCACGAGACCG 23210 >seq2451 Length=1853 Score = 122 bits (134), Expect = 8e-23 Identities = 231/332 (70%), Gaps = 6/332 (2%) Strand=Plus/Plus Query 47143 TGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTT-TGCGGCGATATTT 47201 |||| | ||| || ||| ||||| |||||||||| ||| ||| |||| | || || Sbjct 976 TGATTGGTTTTGCTGCCGTGGAGGGTATCTTCTTCTCCGGCTCCTTCTGCGCC-ATCTTC 1034 Query 47202 TACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGA 47261 | |||| | || || ||||||||||| ||||| || |||||||| || || | Sbjct 1035 TGGCTGAAGAAGCGCGGTGTGATGCCCGGCCTGACGTTCAGTAACGAGCTCATTTCCCGC 1094 Query 47262 GACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAACA-CTAGAGTCGATCAAAA 47320 ||||| || |||||||| |||||||||| ||| ||||||| | | | || | || || Sbjct 1095 GACGAGGGTCTGCACACGGACTTTGCCTGCCTCCTGTACAACAGCCACA-TCAAGCACAA 1153 Query 47321 GTTGGACGTGCCCAC-CGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGT 47379 | | | | || || ||| |||| | | || || || || || |||| ||||| Sbjct 1154 GCT-GCCCCGCGAACGCGTGCTGAACATCATCACGGACGCTGTTGCGATCGAGAAGGAGT 1212 Query 47380 TTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGT 47439 | || |||| | ||||||| | | || ||||||||||| ||||||| ||| Sbjct 1213 TCATCTGCGAGTCGCTGCCCGTGCGCCTGATTGGCATGAACGCGGACCTGATGAGCCAGT 1272 Query 47440 ACATCGAATTTGTCGCCGACCGCCTGCTCGTT 47471 |||| || ||||| || ||||| ||||| ||| Sbjct 1273 ACATTGAGTTTGTTGCGGACCGTCTGCTTGTT 1304 >seq3993 Length=1029 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | || | ||| | || | ||| ||||| || || || ||||| || | Sbjct 59 CCGCCGCGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 118 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || |||||| | || | |||||||| || || || Sbjct 119 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGGGGA 178 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| ||| ||| | | |||| ||||| | ||| || Sbjct 179 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 238 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 |||| || | ||| |||||||| | ||| || ||||||||||||||| Sbjct 239 TCGAGGGCAATCGTCTTGCCGGTTAAAGTCTTCACAAAAATCTGCATG 286 >seq5372 Length=561 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| ||||| || || || ||||| || | | |||||| || || ||||| || || Sbjct 74 CGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCC 133 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 |||| | || | |||||||| || ||||| ||||||||||||||| ||| ||| ||| Sbjct 134 AGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTT 193 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | |||| ||||| | ||| || |||| || | ||| ||||||||||| || Sbjct 194 CACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGT 253 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 254 CTTCACGAAGATCTGCAT 271 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| ||||| || || || ||||| || | | |||||| || || ||||| || || Sbjct 302 CGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCC 361 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 |||| | || | |||||||| || ||||| ||||||||||||||| ||| ||| ||| Sbjct 362 AGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTT 421 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | |||| ||||| | ||| || |||| || | ||| ||||||||||| || Sbjct 422 CACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGT 481 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 482 CTTCACGAAGATCTGCAT 499 >seq1880 Length=2433 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| ||||| || || || ||||| || | | |||||| || || ||||| || || Sbjct 2232 CGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCC 2291 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 |||| | || | |||||||| || ||||| ||||||||||||||| ||| ||| ||| Sbjct 2292 AGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTT 2351 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | |||| ||||| | ||| || |||| || | ||| ||||||||||| || Sbjct 2352 CACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGT 2411 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 2412 CTTCACGAAGATCTGCAT 2429 >seq4543 Length=829 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| ||||| || || || ||||| || | | |||||| || || ||||| || || Sbjct 633 CGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCC 692 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 |||| | || | |||||||| || ||||| ||||||||||||||| ||| ||| ||| Sbjct 693 AGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTT 752 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | |||| ||||| | ||| || |||| || | ||| ||||||||||| || Sbjct 753 CACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGT 812 Query 127096 TTTTACAAAAATCTGCA 127112 || || || ||||||| Sbjct 813 CTTCACGAAGATCTGCA 829 >seq1044 Length=4624 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||| | || | || ||||| || || |||||||| || | Sbjct 939 CCACCGCGCAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGCG 880 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| || |||||| |||| | |||||||| || || || Sbjct 879 AGGGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 820 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||||||| ||| || ||||| | |||| |||||| | |||||| Sbjct 819 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACC 760 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || || ||||| || || || |||||||||||||| Sbjct 759 TCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACAAAAATCTGCAT 713 >seq4373 Length=891 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| ||||| || || || ||||| || | | |||||| || || ||||| || || Sbjct 675 CGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGCGTGCGGCCCTCCTCCAGCTGCTTGCC 734 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 |||| | || | |||||||| || || || ||||||||||||||| ||| ||| ||| Sbjct 735 AGCGAAAATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTT 794 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | |||| ||||| | ||| || |||| || | ||| ||||||||||| || Sbjct 795 CACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGT 854 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 855 CTTCACGAAGATCTGCAT 872 >seq5243 Length=600 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||| | || | || |||||||| || || ||||| || | Sbjct 572 CCACCGCGAAGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCG 513 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| || |||||| |||| | |||||||| || || || Sbjct 512 AGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 453 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||||||| ||| || ||||| | |||| |||||| | |||||| Sbjct 452 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACC 393 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || || ||||| || || || || ||||||||||| Sbjct 392 TCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCAT 346 >seq2033 Length=2245 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||| | || | || |||||||| || || ||||| || | Sbjct 434 CCACCGCGAAGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCG 375 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| || |||||| |||| | |||||||| || || || Sbjct 374 AGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 315 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||||||| ||| || ||||| | |||| |||||| | |||||| Sbjct 314 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACC 255 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || || ||||| || || || || ||||||||||| Sbjct 254 TCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCAT 208 >seq587 Length=8987 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||| | || | || ||||| || || || ||||| ||| | Sbjct 1911 CCACCGCGCAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 1852 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| || |||||| |||| | |||||||| || || || Sbjct 1851 AGGGTGCGGCCCTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 1792 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||||||| ||| || ||||| | |||| |||||| | |||||| Sbjct 1791 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACC 1732 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || || ||||| || || || || ||||||||||| Sbjct 1731 TCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCAT 1685 >seq5492 Length=529 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || |||||| |||| | |||||||| || || || || || |||||| Sbjct 502 TCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTG 443 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || ||||| | |||| |||||| | |||||| |||| || | Sbjct 442 TCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATG 383 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || ||||| || || || || ||||||||||| Sbjct 382 GTCTTACCGGTGAGGGTCTTCACGAAAATCTGCAT 348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475467419843840