Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1 120 3e-22 >seq1 Length=157016 Score = 120 bits (132), Expect = 3e-22 Identities = 340/515 (66%), Gaps = 13/515 (3%) Strand=Plus/Minus Query 123211 ACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAACGCCGTGCGGCACG 123270 |||| | | || ||| |||| ||||||| || || | ||||||| ||| || ||| Sbjct 23223 ACGGTACCTCCAACGGTCTCGTGCCCATGCTCCGTGTGTTCAATAACACCGCCCGCTACG 23164 Query 123271 TCGACCAGGGCGGC---AAACGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACG 123327 | |||||||| ||| || || || || || | || | || || || |||||||||| Sbjct 23163 TGGACCAGGGTGGCGGTAAGCGTAAGGGTGCCTTCGCCGTGTACCTCGAGCCGTGGCACG 23104 Query 123328 TTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCC 123387 || |||| ||| || | | || || |||| || ||| || | |||| Sbjct 23103 CCGACGTGTTCGAGTTCGTCCGCCTGAAGCGAAACACCGGTAAGGAGGACCAACGTGCCC 23044 Query 123388 GCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACG 123447 ||||| |||| ||||| | ||| | || ||| | || ||| || || || || || | Sbjct 23043 GCGATCTGTTTTACGCCCTTTGGATTCCTGATCTCTTCATGAAGCGTGTCAAGGAGGAGG 22984 Query 123448 GCGTGTGGTCGCTCATGTGTCCCGATCG-GTGTCCCGGCTTGAGCGACGTTTACGGCAAT 123506 | |||| |||| ||| | ||| | || ||| | ||| |||||||| |||||| | Sbjct 22983 GACAGTGGACGCTGATG-GACCCCAACGTGTGCACAGGCCTGAGCGACTGCTACGGCGAG 22925 Query 123507 CAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAG-GTTAGTCAGGTTCC 123565 |||| || | ||||| | | ||||| ||||| || | || | | |||| Sbjct 22924 GAGTTCGAGCGGAAGTACGAGGAGTACGAAAA-GAAGGGAATGGGCGTCAAGACGATTCC 22866 Query 123566 GGCACGTGATTTGTTCAAATTTATTATCGAAA---CACAAGTCGAAACCGGAACGCCGTA 123622 ||| | || |||| ||| ||| | | || ||| ||||| || | Sbjct 22865 GGCGCAGGACTTGTGG---TTTGAGATCCTCATGTCCCAGACCGAGACCGGCGTCCCTTT 22809 Query 123623 CATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAA 123682 |||||| ||||| ||||||||||||| |||| ||||||||| || ||||| || || || Sbjct 22808 CATGCTGTACAAGGACGCCTGCAACAAGAAATCCAATCAGAAGAATTTGGGTACCATCAA 22749 Query 123683 ATGTAGTAATCTTTGCTCCGAAATTATCGAATACA 123717 || ||||| ||| | || |||||||| |||| Sbjct 22748 GTGCTCCAATCTGTGCACGGAGATTATCGAGTACA 22714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451971469375360