Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2451 143 4e-29 seq170 105 1e-17 seq1 86.0 1e-11 >seq2451 Length=1853 Score = 143 bits (158), Expect = 4e-29 Identities = 289/423 (68%), Gaps = 8/423 (2%) Strand=Plus/Minus Query 159644 ACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAAT 159703 || ||||| ||||||||||||||||| || || ||| || |||||||| | || Sbjct 1402 ACCTTCTTATCGAAAAAGTTGGTCTTACCGGTCAAGGAAATCATCTCCATGAAGTCAAAA 1343 Query 159704 GGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACA 159763 |||||| || | ||| ||||| ||||| | | |||| | ||| || ||| Sbjct 1342 GGGTTCGTCGCACCGTAGTGCTTCTCCTCACCGAGGGAAACAAGCAGACGGTCCGCAACA 1283 Query 159764 AATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCT 159823 || || ||||| | |||| | || ||| || || | ||| | ||||| |||| Sbjct 1282 AACTCAATGTACTGGCTCATCAGGTCCGCGTTCATGCCAATCAGGCGCACGGGCAGCGAC 1223 Query 159824 TCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCG 159883 || | | ||||||||||| ||| | || || || || | || | | || |||||| Sbjct 1222 TCGCAGATGAACTCCTTCTCGATCGCAACAGCGTCCGTGATGATGTTCAGCACGCGTTCG 1163 Query 159884 TACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGT 159943 | ||||| | |||||| || |||||||||| |||||||| |||||| Sbjct 1162 CGGGGCAGCTTGTGCTTGATGTGGCTGTTGTACAGGAGGCAGGCAAAGTCCGTGTGCAGA 1103 Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGA---TGAGGCCCGGCATGATCCCACGC 160000 |||||||| || || |||| |||||| || ||| | ||||| ||||| | || ||| Sbjct 1102 CCCTCGTCGCGGGAAATGAGCTCGTT--AC-TGAACGTCAGGCCGGGCATCACACCGCGC 1046 Query 160001 GGTTTGAGCCAAAAAATGGCCGCAAAAGCA-CCGCTAAAAAAGATCCCCTCCACGGCCGC 160059 || ||||| || ||||| ||| ||| | ||| || ||||| ||||||||||| || Sbjct 1045 TTCTTCAGCCAGAAGATGGC-GCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGCAGC 987 Query 160060 AAA 160062 ||| Sbjct 986 AAA 984 >seq170 Length=23694 Score = 105 bits (116), Expect = 1e-17 Identities = 219/326 (67%), Gaps = 0/326 (0%) Strand=Plus/Minus Query 159644 ACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAAT 159703 || ||||| ||||||||||||||||| || || ||| || |||||||| | || Sbjct 336 ACCTTCTTTTCGAAAAAGTTGGTCTTACCGGTCAAGGAAATCATCTCCATGAAGTCAAAA 277 Query 159704 GGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACA 159763 |||||| || | ||| ||||| ||||| | | |||| | ||| || ||| Sbjct 276 GGGTTCGTCGCACCGTAGTGCTTCTCCTCACCGAGGGAAACAAGCAGACGGTCCGCAACA 217 Query 159764 AATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCT 159823 || || ||||| | |||| | || ||| || || | ||| | ||||| |||| Sbjct 216 AACTCAATGTACTGGCTCATCAGGTCCGCGTTCATGCCAATCAGGCGCACGGGCAGCGAC 157 Query 159824 TCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCG 159883 || | | ||||||||||| ||| | || || || || | || | | || |||||| Sbjct 156 TCGCAGATGAACTCCTTCTCGATCGCAACAGCGTCCGTGATGATGTTCAGCACGCGTTCG 97 Query 159884 TACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGT 159943 | ||||| | |||||| || |||||||||| |||||||| |||||| Sbjct 96 CGGGGCAGCTTGTGCTTGATGTGGCTGTTGTACAGGAGGCAGGCAAAGTCCGTGTGCAGA 37 Query 159944 CCCTCGTCCCGAGAGATGAACTCGTT 159969 ||||| || || || |||| |||||| Sbjct 36 CCCTCATCGCGGGAAATGAGCTCGTT 11 >seq1 Length=157016 Score = 86.0 bits (94), Expect = 1e-11 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 204239 GTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATG 204298 ||||| || ||||| ||||||||| || | |||||||| |||| ||| ||||||||| Sbjct 22152 GTGAAGGGCTCGAAGCACTCGTTGTTACCCAGAATCTGAGAGGTGGAGGCGGTGGGCATG 22211 Query 204299 GGAGCCAGGAGCAGGGAGTTGCGCA 204323 || |||||||| |||||||| |||| Sbjct 22212 GGCGCCAGGAGGAGGGAGTTACGCA 22236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795099380104960