Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1044 143 6e-29 seq587 143 6e-29 seq5243 136 9e-27 seq2033 136 9e-27 seq4543 125 2e-23 seq3993 125 2e-23 seq1880 125 2e-23 seq5372 120 7e-22 seq4373 116 9e-21 seq5492 104 6e-17 >seq1044 Length=4624 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| || |||||||| |||| |||||||| || | || | || || Sbjct 924 AGCACGAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGCGAGGGTGCGGCCCTCC 865 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || |||||||||||||||||||||||||| || ||||| ||| Sbjct 864 TCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCC 805 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | | ||| ||| Sbjct 804 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTC 745 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||||||||| || Sbjct 744 TTACCGGTGAGGGTCTTCACAAAAATCTG 716 >seq587 Length=8987 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| || |||||||| |||| ||||||||| || | || | || || Sbjct 1896 AGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCC 1837 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || |||||||||||||||||||||||||| || ||||| ||| Sbjct 1836 TCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCC 1777 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | | ||| ||| Sbjct 1776 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTC 1717 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| ||||| || Sbjct 1716 TTACCGGTGAGGGTCTTCACGAAAATCTG 1688 >seq5243 Length=600 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || |||||||| || ||||| || |||| ||||||||| || | || Sbjct 566 CGAAGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCGAGGGTG 507 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| || |||||||||||||||||||||||||| || ||| Sbjct 506 CGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCT 447 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| |||||| | | || || || | Sbjct 446 TCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGG 387 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | ||| |||||||| ||||| || ||||| ||||| || Sbjct 386 GCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTG 349 >seq2033 Length=2245 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || |||||||| || ||||| || |||| ||||||||| || | || Sbjct 428 CGAAGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCGAGGGTG 369 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| || |||||||||||||||||||||||||| || ||| Sbjct 368 CGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCT 309 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| |||||| | | || || || | Sbjct 308 TCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGG 249 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | ||| |||||||| ||||| || ||||| ||||| || Sbjct 248 GCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTG 211 >seq4543 Length=829 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| ||||||||| || | || | || || Sbjct 619 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCC 678 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || ||||| ||||||||||||||||| ||| ||| || || ||| Sbjct 679 TCCAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 738 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| ||||| | | || || || | | |||||| Sbjct 739 TGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTC 798 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || Sbjct 799 TTGCCGGTCAGCGTCTTCACGAAGATCTG 827 >seq3993 Length=1029 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| ||||||||| || | || | || || Sbjct 74 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCC 133 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || ||||| ||||| ||||||||||| || ||| || || ||| Sbjct 134 TCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 193 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| ||||| | | || || || | | |||||| Sbjct 194 TGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTC 253 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | ||| ||||||||||| || Sbjct 254 TTGCCGGTTAAAGTCTTCACAAAAATCTG 282 >seq1880 Length=2433 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| ||||||||| || | || | || || Sbjct 2218 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCC 2277 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || ||||| ||||||||||||||||| ||| ||| || || ||| Sbjct 2278 TCCAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 2337 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| ||||| | | || || || | | |||||| Sbjct 2338 TGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTC 2397 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || Sbjct 2398 TTGCCGGTCAGCGTCTTCACGAAGATCTG 2426 >seq5372 Length=561 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| ||||||||| || | || | || || Sbjct 60 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCC 119 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || ||||| ||||| ||||||||||| ||| ||| || || ||| Sbjct 120 TCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 179 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| ||||| | | || || || | | |||||| Sbjct 180 TGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTC 239 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || Sbjct 240 TTGCCGGTCAGCGTCTTCACGAAGATCTG 268 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| ||||||||| || | || | || || Sbjct 288 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCC 347 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || ||||| ||||| ||||||||||| ||| ||| || || ||| Sbjct 348 TCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 407 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| ||||| | | || || || | | |||||| Sbjct 408 TGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTC 467 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || Sbjct 468 TTGCCGGTCAGCGTCTTCACGAAGATCTG 496 >seq4373 Length=891 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| ||||||||| || | || | || || Sbjct 661 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGCGTGCGGCCCTCC 720 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || ||||| ||||| ||||||||||| || ||| || || ||| Sbjct 721 TCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 780 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| ||||| | | || || || | | |||||| Sbjct 781 TGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTC 840 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || Sbjct 841 TTGCCGGTCAGCGTCTTCACGAAGATCTG 869 >seq5492 Length=529 Score = 104 bits (114), Expect = 6e-17 Identities = 129/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 199450 GTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTG 199509 ||||||||| || || | || || || |||||||| || ||||||||||||||||| Sbjct 527 GTTGTAGTCCGCAGGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTG 468 Query 199510 CTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569 ||||||||| || ||||| ||||| ||||| ||| ||| |||| |||||| Sbjct 467 CTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTC 408 Query 199570 TGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | | || || || | | ||| |||||||| ||||| || ||||| ||||| || Sbjct 407 GCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTG 351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178836770696272