Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq587 147 2e-30 seq5372 143 3e-29 seq4373 143 3e-29 seq1880 143 3e-29 seq4543 141 9e-29 seq3993 134 1e-26 seq5243 129 6e-25 seq2033 129 6e-25 seq5492 109 5e-19 >seq587 Length=8987 Score = 147 bits (162), Expect = 2e-30 Identities = 169/225 (75%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 38235 TTTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTC 38294 ||| ||| |||||| || ||||| || || ||||| || || |||||| || |||| ||| Sbjct 1676 TTTTAAAGAATGCAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTC 1735 Query 38295 GAGGCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCC 38353 ||||||| ||||| | | | |||| | || | || |||| ||||| || || || || Sbjct 1736 GAGGCCAGCGACACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGTATCCC 1794 Query 38354 CGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAA 38413 | | ||||| ||||| ||||| | ||| || || |||||||| || | ||||||||| Sbjct 1795 CCCGGACCAGCAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGAGGGCCGCACCCTCGC 1854 Query 38414 CGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||||||||| ||||| | || || || | ||||| || Sbjct 1855 CGACTACAACATCCAGAAGGAGTCCACCCTCCACCTCGTGCTCCG 1899 >seq5372 Length=561 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| || || || |||| || ||||| | | Sbjct 271 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 212 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| ||||| | ||||| Sbjct 211 GACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCA 153 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||||| ||| ||||| |||||||| || | ||||| ||| |||||||| Sbjct 152 GCAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAA 93 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| |||||||||| | ||||| || || | ||||| Sbjct 92 CATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGTGGCGG 45 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| || || || |||| || ||||| | | Sbjct 499 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 440 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| ||||| | ||||| Sbjct 439 GACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCA 381 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||||| ||| ||||| |||||||| || | ||||| ||| |||||||| Sbjct 380 GCAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAA 321 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| |||||||||| | ||||| || || | ||||| Sbjct 320 CATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGTGGCGG 273 >seq4373 Length=891 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| || || || |||| || ||||| | | Sbjct 872 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 813 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| |||||| | ||||| Sbjct 812 GACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCA 754 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||||| ||| ||||| |||||||| || | ||||| || |||||||| Sbjct 753 GCAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTTGCGGACTACAA 694 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| |||||||||| | ||||| || || | ||||| Sbjct 693 CATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGTGGCGG 646 >seq1880 Length=2433 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| || || || |||| || ||||| | | Sbjct 2429 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 2370 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| ||||| | ||||| Sbjct 2369 GACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCA 2311 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||||| ||| ||||| |||||||| || | ||||| ||| |||||||| Sbjct 2310 GCAGCGTCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAA 2251 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| |||||||||| | ||||| || || | ||||| Sbjct 2250 CATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGTGGCGG 2203 >seq4543 Length=829 Score = 141 bits (156), Expect = 9e-29 Identities = 169/227 (74%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304 |||| || ||||| || ||||| || ||||| || || || |||| || ||||| | || Sbjct 829 TGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGCG 770 Query 38305 ACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 ||| | | |||| | || | || |||| ||||| ||||| ||||| | ||||| Sbjct 769 ACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 711 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||||| ||| ||||| |||||||| || | ||||| ||| ||||||||| Sbjct 710 CAGCGTCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 651 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| |||||||||| | ||||| || || | ||||| Sbjct 650 ATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGTGGCGG 604 >seq3993 Length=1029 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || || || || || | || ||||| || || || |||| || ||||| Sbjct 288 AACATGCAGATTTTTGTGAAGACTTTAACCGGCAAGACGATTGCCCTCGAGGTGGAGGCG 229 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | ||||| | | |||| | || | || |||| ||||| ||||| |||||| | || Sbjct 228 AGCGACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCTGA 170 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| ||||||| ||| ||||| |||||||| || | ||||| ||| ||||| Sbjct 169 CCAGCAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTA 110 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||| ||||| |||||||||| | ||||| || || | ||||| Sbjct 109 CAACATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGCGGCGG 59 >seq5243 Length=600 Score = 129 bits (142), Expect = 6e-25 Identities = 162/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 || |||||| || ||||| || || ||||| || || |||||| || |||| |||||||| Sbjct 342 AAGAATGCAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGC 401 Query 38300 CACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358 || ||||| | | | |||| | || | || |||| ||||| || || || ||| | | Sbjct 402 CAGCGACACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGG 460 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||||| ||||| | ||| || || ||||| || || | ||||||||| |||| Sbjct 461 ACCAGCAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGAGGGCCGCACCCTCGCGGACT 520 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||||| || || | || || || | ||||| || Sbjct 521 ACAACATCCAGAAAGAGTCCACCCTCCACCTCGTGCTCCG 560 >seq2033 Length=2245 Score = 129 bits (142), Expect = 6e-25 Identities = 162/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 || |||||| || ||||| || || ||||| || || |||||| || |||| |||||||| Sbjct 204 AAGAATGCAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGC 263 Query 38300 CACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358 || ||||| | | | |||| | || | || |||| ||||| || || || ||| | | Sbjct 264 CAGCGACACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGG 322 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||||| ||||| | ||| || || ||||| || || | ||||||||| |||| Sbjct 323 ACCAGCAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGAGGGCCGCACCCTCGCGGACT 382 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||||| || || | || || || | ||||| || Sbjct 383 ACAACATCCAGAAAGAGTCCACCCTCCACCTCGTGCTCCG 422 >seq5492 Length=529 Score = 109 bits (120), Expect = 5e-19 Identities = 138/187 (74%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 || |||||| || ||||| || || ||||| || || |||||| || |||| |||||||| Sbjct 344 AAGAATGCAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGC 403 Query 38300 CACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358 || ||||| | | | |||| | || | || |||| ||||| || || || ||| | | Sbjct 404 CAGCGACACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGG 462 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||||| ||||| | ||| || || ||||| || || | ||||||| |||| Sbjct 463 ACCAGCAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGAGGGCCGCACCCCTGCGGACT 522 Query 38419 ACAACAT 38425 ||||||| Sbjct 523 ACAACAT 529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500137687869440