Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1581 331 1e-85 seq586 230 3e-55 seq372 161 1e-34 seq1 104 3e-17 >seq1581 Length=2941 Score = 331 bits (366), Expect = 1e-85 Identities = 626/916 (68%), Gaps = 25/916 (3%) Strand=Plus/Minus Query 7241 CACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAAC 7300 || || ||||| || || || ||||| |||| | | ||| || | | ||| | | Sbjct 1380 CAGAGCTCCTCGAAGCGGGCGCGGGTGATGGTGGACTGGAAGTCGATGTTATCGAAGAGG 1321 Query 7301 GAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACAC 7360 | || ||||| ||||| | || | | || || | |||| ||| |||||||| || Sbjct 1320 GCGTCTATTTCGATGGTGGCCTGGGTGGCAGAGGACAGGGTTCTCTTGGCGCGCTCGCAG 1261 Query 7361 GCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTT---CTTATGTTTA 7417 || || || | ||| || ||||| || |||| | || || || ||| | || Sbjct 1260 GCAGTGCGGAGACGGCGGAGGGCGCGGTGGTTGGTGCTCATGTCCTTACCCTTGTTCTTG 1201 Query 7418 CGTTTAAACTCTTCAGAGAAG----TGTCGAAGGAGTCTCGAATCGAAATCTTCACCACC 7473 || || ||||| || | |||| || ||| | || ||| || || |||||||| Sbjct 1200 CGCTTGAACTCCTCGGTGAAGAAGGTGACGAGGCGGTT----ATCAAAGTCCTCACCACC 1145 Query 7474 CAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAA 7533 | ||| ||||| || ||||| || |||||||| ||||||||||| |||||| | | | Sbjct 1144 AAGGTGGGTATCACCGGCGGTGGCCTTGACTTCGAAGATACCTCCGTCAATGGTGAGAAG 1085 Query 7534 CGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT------CGTATCGTC 7587 | ||||| |||||||| ||||| || || |||||||| ||||| | || | || Sbjct 1084 GGTCACATCGAACGTACCGCCACCGAGATCGAAAATGAGGACGTTGCGCTCCTTACCATC 1025 Query 7588 GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG 7647 ||| ||| ||||||||||| |||||||| || || || || || || || ||||| Sbjct 1024 GTC---ACCCTTGTCGAGACCGTAGGCGATAGCGGCGGCAGTGGGCTCGTTGATGATACG 968 Query 7648 AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTT 7707 ||| | || || || || || | ||||| || || || || || || || ||||| Sbjct 967 GAGAACCTCAAGACCGGCGATCGTACCGGCATCCTTGGTGGCCTGACGCTGGGAGTCGTT 908 Query 7708 AAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGC 7767 |||||||| ||||| || || || || | | |||| | ||| || || || | || || Sbjct 907 GAAGTAGGCGGGGACGGTGACCACGGCCTTCTTGACCTGCTTGCCAAGGTAGGCCTCGGC 848 Query 7768 GATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGT 7827 | | || ||||| ||| || ||||| || || ||||||| | || || | || Sbjct 847 GGTCTCCTTCATCTTGAGGAGCACCATGGAGCTGATTTCTTCAGGGGTGAA-GGTCTTGT 789 Query 7828 -TTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTAT 7886 || |||| || | || | | | ||| || || || | || || ||||| Sbjct 788 CCTCGCCGTGGAATTGCACCTGGACGACGGGCTTGTCGTCACCCTTGGTGACCACCTTGA 729 Query 7887 ACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGAC 7946 | | ||| | ||||| ||| ||||||| |||| ||||| | ||||| || | Sbjct 728 AGGGCCAGTGCTTCATGTCGCTCTGGACCTCGGAGTCCTTGAACTTGCGGCCGATCAGGC 669 Query 7947 GCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCC 8006 |||| ||||| || || ||||| | |||||||||||| |||||||| || || || | Sbjct 668 GCTTCGCATCGAAGACGGTGTTGTGGGGGTTCATGGCGACCTGGTTCTTGGCGGCATCAC 609 Query 8007 CGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTT 8066 |||| ||||| || || || || |||||||| || ||||| ||||| || || | Sbjct 608 CGATCAGACGCTC---GGAGTCGGTGAAGGCGACGTAGGAGGGGGTGGTTCGGTTACCCT 552 Query 8067 GGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTG 8126 ||||||| || ||||| || ||||| ||||||||||| ||||| || || || || || | Sbjct 551 GGTCGTTGGCGATAATCTCCACGCGCTCGTTTTGCCACACGCCCACACAGGAGTAGGTCG 492 Query 8127 TTCCTAAATCAATACC 8142 | || ||||||||||| Sbjct 491 TGCCCAAATCAATACC 476 >seq586 Length=8991 Score = 230 bits (254), Expect = 3e-55 Identities = 472/694 (68%), Gaps = 16/694 (2%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| || || ||||| || | || || || || |||||||| || || | ||||| || Sbjct 4134 ATCAAAGTCCTCACCGCCGAGATGGGTGTCACCGGCGGTCGCCTTCACGTTGAAGATGCC 4075 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | || ||| | || | | ||||| |||||||| ||||| || || || ||||| || Sbjct 4074 GTCGTCGATGGTCAAAAGGGTCACATCGAACGTACCGCCACCGAGATCGAAGATGAGCAC 4015 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 ||| | ||| ||| | ||||| |||| |||||| || ||||| || || || || || Sbjct 4014 ATTCTTCTCGCCGTTGGTCTTCTTGTCGATACCGTAGGCAATAGCGGCGGCAGTAGGCTC 3955 Query 7636 ATTAATAATACGAAGACAGTTC-AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 || |||||||| || || ||| | ||| ||||| | | || || || ||||| || | Sbjct 3954 GTTGATAATACGGAG-CACTTCCAAGCCGGCAATGGCGCCAGCGTCCTTGGTCGCCTGAC 3896 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 | || || ||||| |||||||| ||||| || | ||| || | |||| ||| |||| Sbjct 3895 GCTGAGAGTCGTTGAAGTAGGCGGGGACGGTGATGACGGCCTTGGTGATGGTCTCACCGC 3836 Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCG 7814 || | ||||||| || ||||| ||| | || ||||| | |||||||| || | Sbjct 3835 AGTAGGCCTCCGCGACCTCCTTCATCTTGCTCAGCACCATGGCGGAAATCTCCTCCGGGA 3776 Query 7815 CAAACTGTTTC--GTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCG--CAGCA 7870 |||| || ||| | | | || || ||| | | || || || ||| | || Sbjct 3775 AGAACTCCTTGTGGTTGCCCTGGTAC--TCGACTACCACCACCGGCTTG-CCGTCCTTCA 3719 Query 7871 CCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAAC 7930 | | | ||||| | | ||| | ||||| ||| || | | |||| || Sbjct 3718 CGGTG----ACCTTGAAGGGCCAGTGCTTCATGTCGGACTGCAGATCGGGGTCGTCGTAC 3663 Query 7931 TTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGG 7990 || | || || | ||||| |||||||| | ||||| | |||||||||||| |||| Sbjct 3662 TTGCGGCCAATCATGCGCTTGGCATCAAAGATGGTGTTGTGGGGGTTCATGGCGACTTGG 3603 Query 7991 TTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG 8050 ||||| || || || |||| || || || || | || || || ||||| || ||| Sbjct 3602 TTCTTGGCGGCATCACCGACGAGGCGCTCCGAAT---CGGTGAAAGCAACGTAGGACGGG 3546 Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCG 8110 ||||| || || || |||||||| || ||||| || || |||| || | | || || Sbjct 3545 GTCGTACGGTTACCCTGGTCGTTGGCGATAATCTCCACCTGGTCATTCTTGAACACACCC 3486 Query 8111 ACGCACGAATACGTTGTTCCTAAATCAATACCGA 8144 || || || || ||||| || ||||||||||||| Sbjct 3485 ACACAAGAGTAGGTTGTACCCAAATCAATACCGA 3452 >seq372 Length=13613 Score = 161 bits (178), Expect = 1e-34 Identities = 194/263 (74%), Gaps = 3/263 (1%) Strand=Plus/Minus Query 7880 ACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCG 7939 ||||| | | ||| | ||||| ||| ||||||| |||| ||||| | ||| Sbjct 13487 ACCTTGAAGGGCCAGTGCTTCATGTCGCTCTGGACCTCGGAGTCCTTGAACTTGCGGCCG 13428 Query 7940 ATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCC 7999 || || ||||| ||||| || || ||||| | |||||||||||| |||||||| || Sbjct 13427 ATCAGGCGCTTCGCATCGAAGACGGTGTTGTGGGGGTTCATGGCGACCTGGTTCTTGGCG 13368 Query 8000 GCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGA 8059 || || ||||| ||||| || | | || || |||||||| || ||||| || || Sbjct 13367 GCATCACCGATCAGACGCTCGGAGT---CGGTGAAGGCGACGTAGGAGGGGGTGGTACGG 13311 Query 8060 TTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAA 8119 || || |||||||| || ||||| || ||||| ||||||||||| ||||| ||||| || Sbjct 13310 TTACCCTGGTCGTTGGCGATAATCTCCACGCGCTCGTTTTGCCACACGCCCACGCAGGAG 13251 Query 8120 TACGTTGTTCCTAAATCAATACC 8142 || || || || ||||||||||| Sbjct 13250 TAGGTCGTGCCCAAATCAATACC 13228 >seq1 Length=157016 Score = 104 bits (114), Expect = 3e-17 Identities = 170/245 (69%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 105825 GTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGT 105884 ||||||||| ||||||||||| || ||| ||||||||| || ||||| || | || Sbjct 23261 GTGAACGTGGAACCCAATACCACCGGCCGCCTTACTGATGGTGGCGCACTCCTTGAGGGT 23320 Query 105885 ATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTG 105944 |||||||| || |||||||| || ||||| | || | ||||| || || ||| || Sbjct 23321 GTCGTAAATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAGGAACTCATCTG 23380 Query 105945 TGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGA 106004 || | || ||||| || |||||||| || || || || || | || || || || Sbjct 23381 AGGCTTCGGGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGGTAAAGAATCCCAAGGA 23440 Query 106005 TAACGCTTCGTATGTTTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGAC 106064 | ||||| || | | | | || || | || ||||||||||||||| || || Sbjct 23441 CATGAGATCGTAGGTGCGGCGAATGCGCTCCATGTTGTTTCCATGAATACCAATCGCCAC 23500 Query 106065 GCGCA 106069 |||| Sbjct 23501 ACGCA 23505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635088213677440