Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 233 2e-56 seq910 87.8 2e-12 seq909 87.8 2e-12 >seq1 Length=157016 Score = 233 bits (258), Expect = 2e-56 Identities = 917/1432 (64%), Gaps = 30/1432 (2%) Strand=Plus/Plus Query 109702 ACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTA 109761 || |||| |||||| ||||| || ||||| || || |||| ||| ||||| Sbjct 22089 ACGAGATACTTGTTCACCACCGGGAACTCACCGCTCAGCACACGACGGACGTAAATGTTC 22148 Query 109762 GTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGC 109821 | |||| |||| ||||| ||||| ||||| || || || || | ||||| || |||||| Sbjct 22149 GACGTGAAGGGCTCGAAGCACTCGTTGTTACCCAGAATCTGAGAGGTGGAGGCGGTGGGC 22208 Query 109822 ATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCG 109881 ||||| |||| ||| || ||| || | |||||| | | || |||| | || Sbjct 22209 ATGGGCGCCAGGAGGAGGGAGTTACGCAACCCCTTCTCCATGACACGCTTCTTGAGGGCA 22268 Query 109882 TCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACA 109941 ||||| | | || || || | | || ||||| | || || || Sbjct 22269 TCCCAGTTCCAGCGGCCGCTCG---TGGGCTGTTTCTCCCATAAGTCGAACTGCAGCTTC 22325 Query 109942 CCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCG 110001 ||||| | ||||| |||||||| |||| || | ||||| ||||| || | || Sbjct 22326 CCCTCCGAGGCAGGGCTGCCCTTGAAGGTCTCATAGGGACCCTCCACCTCCGCGAGGTCC 22385 Query 110002 GATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGA 110061 | || | ||| | || || | || || ||||| || || | |||| | | Sbjct 22386 GTGGAGGACTCCACCGCGGCGTAGTAGATGGTCTCGAAGATCTCCTCATTGAGCTTCTGC 22445 Query 110062 GACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACA 110121 | ||| || | |||||| |||| |||||||| |||| ||||| ||||| || Sbjct 22446 GCCTCCTCGCTCGTGAAGGGGAGACGGAGGAGAATAAAGGCATCGGCTAGCCCCTGCACG 22505 Query 110122 CCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAG-CAGTTTCTACGGGGTAAAA 110180 || || || || ||||| || | ||| | | || | ||||||| |||||||| | Sbjct 22506 CCAAGGCCGATCGGGCGGTGGCGCTCGTT-GCTCCTCTTGGCAGTTTCCACGGGGTAGTA 22564 Query 110181 GTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTT 110240 ||||||| ||||| || || || || | ||| || ||| |||| |||| ||| Sbjct 22565 ACTGCGGTCAATGACGCGGTTCAGGTTGTACGTAACGTCCTTGGTGACCTCATAGAGGCG 22624 Query 110241 GTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAG 110300 | || |||||| | | ||||| | |||| | ||| ||| || || || || || Sbjct 22625 TTGGTGGTCGAACACCTGCTTCTCCACGTCGACAAACTTGCTGAGGGCGATGGAGGCGAG 22684 Query 110301 ATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGA 110360 ||||| || | ||||| || ||| |||||| || | ||| ||||| |||| ||||| Sbjct 22685 GTTGCAGACGGCGGTCTCATCCTTGGAGGTGTACTCGATAATCTCCGTGCACAGATTGGA 22744 Query 110361 ACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAG 110420 | ||| ||| |||||| ||||||||||| ||||| |||||| || ||||| || || Sbjct 22745 GCACTTGATGGTACCCAAATTCTTCTGATTGGATTTCTTGTTGCAGGCGTCCTTGTACAG 22804 Query 110421 CATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACAT-CGGCGG 110479 |||| | ||| || || || ||||| ||| |||| || | ||| | | | ||| Sbjct 22805 CATGAAAGGGACGCCGGTCTCGGTCTGGGACATGAGGATCTCAAACCACAAGTCCTGCGC 22864 Query 110480 CGGGGACAGTTGCGTTAGCG---AGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAA 110536 ||| | | | || || | || | || ||||||| |||| ||| | Sbjct 22865 CGG----AATCGTCTTGACGCCCATTCCCTTCTTTTCGTACTCCTCGTACTTCCGCTCGA 22920 Query 110537 ATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAAT 110596 | |||| ||||| || || || | | || ||| | || | ||| | Sbjct 22921 ACTCCTCGCCGTAGCAGTCGCTCAGGCCTGTGCACACGTTGGGGTCCATCAGCGTCCACT 22980 Query 110597 TTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGT 110656 ||| |||||| || | ||||||||| || ||||||||||| | || | || || | Sbjct 22981 GTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAGGGCGTAAAACAGAT 23040 Query 110657 CACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATAT 110716 | ||| ||| || || | ||| ||| | || | || || | | | Sbjct 23041 CGCGGGCACGTTGGTCCTCCTTACCGGTGTTTCGCTTCAGGCGGACGAACTCGAACACGT 23100 Query 110717 CCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG---ACGACCCGCCTGGT 110773 | | |||||| || ||||| || || |||| || |||||||| || || |||||| Sbjct 23101 CGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTTACCGCCACCCTGGT 23160 Query 110774 TAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGAC 110833 || ||||| || ||| |||||| || | |||||| || | | || | ||| || Sbjct 23161 CCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAGACCGTTGGAGGTAC 23220 Query 110834 CATTTGTACCCCTAATTCTGGACTTATTGGCA---CGAATGTCGTGGATATGCATACCAA 110890 | || ||||| | || | || || | || |||| ||| | || | |||| Sbjct 23221 CGTTCGTACCGGCGA---TGTAACTACCGGAAGAGCGGATGTTGTGAACGTGGAACCCAA 23277 Query 110891 TACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAA 110950 ||||||| ||| |||||| || || ||||| |||| || | ||||| ||||| | Sbjct 23278 TACCACCGGCCGCCTTACTGATGGTGGCGCACTCCTTGAGGGTGTCGTAAATGCCATCGA 23337 Query 110951 TCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCG 111010 | || |||| |||| | || ||||| ||| ||||||||| || || || | Sbjct 23338 TACTGTCGTCCTTCATGGCCACGAGGAAGCAGGAACTCATCTGAGGCTTCGGGGTACCGG 23397 Query 111011 CATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTA--TGT 111068 | ||||| || ||||| || || || | || | || |||||| | ||| || Sbjct 23398 CGTTGAACAGGGTAGGGGTGGCGTGGGTAAAGAATCCCAAGGACATGAGATCGTAGGTGC 23457 Query 111069 GTCGAGTGCGGAGGGTACATCT--TTACCGTGAATACCAATGGCAACTCGCA 111118 | ||| ||| | | ||| | || || ||||||||||| || || |||| Sbjct 23458 GGCGAATGC----GCTCCATGTTGTTTCCATGAATACCAATCGCCACACGCA 23505 >seq910 Length=5437 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 136707 ACCGTTCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTC 136766 |||| || ||||||||||| ||||||||||||| || |||| |||||||||| ||||| Sbjct 810 ACCGCTCCTATAGCTCAGTCGGTTAGAGCGTGGGTCTAATAAGCCCAAGGTCACAGGTTC 751 Query 136767 GAGCCCCGTTGGGAACAGCTTTT 136789 || ||| ||||||| || |||| Sbjct 750 GACCCCTGTTGGGAGCACGTTTT 728 >seq909 Length=5446 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 136707 ACCGTTCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTC 136766 |||| || ||||||||||| ||||||||||||| || |||| |||||||||| ||||| Sbjct 804 ACCGCTCCTATAGCTCAGTCGGTTAGAGCGTGGGTCTAATAAGCCCAAGGTCACAGGTTC 745 Query 136767 GAGCCCCGTTGGGAACAGCTTTT 136789 || ||| ||||||| || |||| Sbjct 744 GACCCCTGTTGGGAGCACGTTTT 722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588934653884800