Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1 165 1e-35 seq2451 118 1e-21 seq60 91.5 2e-13 >seq1 Length=157016 Score = 165 bits (182), Expect = 1e-35 Identities = 462/708 (65%), Gaps = 11/708 (2%) Strand=Plus/Plus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 || ||||||| |||| |||| || ||||| || || ||||||| || || | ||||||| Sbjct 22140 TAAATGTTCGACGTGAAGGGCTCGAAGCACTCGTTGTTACCCAGAATCTGAGAGGTGGAG 22199 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || || ||||| || |||| | || |||||| | ||||| ||| ||| || | | Sbjct 22200 GCGGTGGGCATGGGCGCCAGGAGGAGGGAGTTACGCAACCCCTTCTCCATGACACGCTTC 22259 Query 106055 TTGAGAACATCCCAGTCGTAGTTGA-GCTTG------GTTTCACCTTCCCACATATCAAA 106107 ||||| ||||||||| || | ||| | ||||| ||||| | || || Sbjct 22260 TTGAGGGCATCCCAGTTCCAGCGGCCGCTCGTGGGCTGTTTC----TCCCATAAGTCGAA 22315 Query 106108 TTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC 106167 || ||| ||| | || | || |||| || |||||||||| ||| | | || Sbjct 22316 CTGCAGCTTCCCCTCCGAGGCAGGGCTGCCCTTGAAGGTCTCATAGGGACCCTCCACCTC 22375 Query 106168 AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 106227 || | || | | ||||| | |||| || ||||| || ||||| |||| Sbjct 22376 CGCGAGGTCCGTGGAGGACTCCACCGCGGCGTAGTAGATGGTCTCGAAGATCTCCTCATT 22435 Query 106228 CATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAG 106287 | || || || || || || | | ||| | |||||| |||| || || Sbjct 22436 GAGCTTCTGCGCCTCCTCGCTCGTGAAGGGGAGACGGAGGAGAATAAAGGCATCGGCTAG 22495 Query 106288 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAAC 106347 || || || || | || || || | ||| ||| || | | ||||| || || Sbjct 22496 CCCCTGCACGCCAAGGCCGATCGGGCGGTGGCGCTCGTTGCTCCTCTTGGCAGTTTCCAC 22555 Query 106348 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 106407 ||| || || | | ||||||||| ||||| || || | ||||| ||| |||| || Sbjct 22556 GGGGTAGTAACTGCGGTCAATGACGCGGTTCAGGTTGTACGTAACGTCCTTGGTGACCTC 22615 Query 106408 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGAT 106467 || || || | || || | |||| | | |||| |||| |||||||| Sbjct 22616 ATAGAGGCGTTGGTGGTCGAACACCTGCTTCTCCACGTCGACAAACTTGCTGAGGGCGAT 22675 Query 106468 TGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACA 106527 || || | ||||| || || ||||||||||| |||||||| | ||| || || || Sbjct 22676 GGAGGCGAGGTTGCAGACGGCGGTCTCATCCTTGGAGGTGTACTCGATAATCTCCGTGCA 22735 Query 106528 CAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATC 106587 || ||||| | ||| || || ||||||||||| || || || |||||||| || || Sbjct 22736 CAGATTGGAGCACTTGATGGTACCCAAATTCTTCTGATTGGATTTCTTGTTGCAGGCGTC 22795 Query 106588 CTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAAT 106635 |||||| |||||| | || || ||||| ||||| ||| |||| || Sbjct 22796 CTTGTACAGCATGAAAGGGACGCCGGTCTCGGTCTGGGACATGAGGAT 22843 >seq2451 Length=1853 Score = 118 bits (130), Expect = 1e-21 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| ||| ||| |||||||| || |||||||| || || || ||| ||||| Sbjct 1121 GGCAAAGTCCGTGTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCC 1062 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 ||||| | ||| |||||||||| ||| | || |||||||| || |||||||||||||| Sbjct 1061 GGGCATCACACCGCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGAT 1002 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTC 117425 ||||||||| ||||| ||| |||||||| Sbjct 1001 ACCCTCCACGGCAGCAAAACCAATCAGGCGCTC 969 >seq60 Length=41165 Score = 91.5 bits (100), Expect = 2e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 136164 GCTCTTATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATC 136223 |||| |||||||||||||| ||||||| ||| | ||| ||| ||||||||||||| |||| Sbjct 3221 GCTCCTATAGTGTAGTGGTTATCACTTCGGATTCTGATTCCGACAACCCTGGTTCGAATC 3162 Query 136224 CAGGTAGGAG 136233 |||||||||| Sbjct 3161 CAGGTAGGAG 3152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589939383347840