Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq5243 127 5e-24 seq2033 127 5e-24 seq587 122 2e-22 seq5372 120 7e-22 seq1880 120 7e-22 seq4543 118 2e-21 seq1044 116 8e-21 seq5492 100 6e-16 >seq5243 Length=600 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || ||||||||||| || || ||||| || || || || | || || ||| Sbjct 554 ACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTCG 495 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| |||||||| || || || ||||| || || || ||||| ||||| || Sbjct 494 AGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGG 435 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||||||||| |||||||| || || || |||| | ||||| Sbjct 434 ATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTA 375 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || | || || ||||| | |||||| Sbjct 374 CCGGTGAGGGTCTTCACGAAAATCTGCATT 345 >seq2033 Length=2245 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || ||||||||||| || || ||||| || || || || | || || ||| Sbjct 416 ACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTCG 357 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| |||||||| || || || ||||| || || || ||||| ||||| || Sbjct 356 AGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGG 297 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||||||||| |||||||| || || || |||| | ||||| Sbjct 296 ATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTA 237 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || | || || ||||| | |||||| Sbjct 236 CCGGTGAGGGTCTTCACGAAAATCTGCATT 207 >seq587 Length=8987 Score = 122 bits (134), Expect = 2e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| ||||| || || | || || || Sbjct 1893 ACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTCC 1834 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| |||||||| || || || ||||| || || || ||||| ||||| || Sbjct 1833 AGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGG 1774 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||||||||| |||||||| || || || |||| | ||||| Sbjct 1773 ATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTA 1714 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || | || || ||||| | |||||| Sbjct 1713 CCGGTGAGGGTCTTCACGAAAATCTGCATT 1684 >seq5372 Length=561 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| || || || || | || || || Sbjct 63 ACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCC 122 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||| || || || || ||||| ||||||||||| || ||||| || Sbjct 123 AGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGG 182 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| |||||||| || ||||| ||||| || |||| || |||||| Sbjct 183 ATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTG 242 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | ||||| Sbjct 243 CCGGTCAGCGTCTTCACGAAGATCTGCAT 271 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| || || || || | || || || Sbjct 291 ACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCC 350 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||| || || || || ||||| ||||||||||| || ||||| || Sbjct 351 AGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGG 410 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| |||||||| || ||||| ||||| || |||| || |||||| Sbjct 411 ATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTG 470 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | ||||| Sbjct 471 CCGGTCAGCGTCTTCACGAAGATCTGCAT 499 >seq1880 Length=2433 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| || || || || | || || || Sbjct 2221 ACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCC 2280 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||| || || || || ||||| ||||||||||| || ||||| || Sbjct 2281 AGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGG 2340 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| |||||||| || ||||| ||||| || |||| || |||||| Sbjct 2341 ATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTG 2400 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | ||||| Sbjct 2401 CCGGTCAGCGTCTTCACGAAGATCTGCAT 2429 >seq4543 Length=829 Score = 118 bits (130), Expect = 2e-21 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| || || || || | || || || Sbjct 622 ACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCC 681 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||| || || || || ||||| ||||||||||| || ||||| || Sbjct 682 AGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGG 741 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| |||||||| || ||||| ||||| || |||| || |||||| Sbjct 742 ATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTG 801 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCA 195139 || |||| || || ||||| | |||| Sbjct 802 CCGGTCAGCGTCTTCACGAAGATCTGCA 829 >seq1044 Length=4624 Score = 116 bits (128), Expect = 8e-21 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || |||||||| || || || || | || || || Sbjct 921 ACGAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGCGAGGGTGCGGCCCTCCTCC 862 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || || || ||||| ||||| || Sbjct 861 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGG 802 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || || |||||||||||| |||||||| Sbjct 801 ATCTTGGCCTTGACGTTCTCGATGGTGTC 773 >seq5492 Length=529 Score = 100 bits (110), Expect = 6e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 194959 ATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGT 195018 || ||||| || ||| | || | || || |||||||||||||| |||||||| || || Sbjct 529 ATGTTGTAGTCCGCAGGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGC 470 Query 195019 TGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTG 195078 || ||||| || || || ||||| ||||| || || || |||||||||||| |||||| Sbjct 469 TGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTG 410 Query 195079 TCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGC 195138 || || || || |||| | ||||| || || | || || ||||| | ||| Sbjct 409 TCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGC 350 Query 195139 ATT 195141 ||| Sbjct 349 ATT 347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109401767251472