Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq4373 98.7 6e-16 seq3993 96.9 2e-15 seq1044 96.9 2e-15 seq5372 95.1 8e-15 seq1880 95.1 8e-15 seq4543 91.5 1e-13 >seq4373 Length=891 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||| ||| | || | || |||||||| || || || || Sbjct 682 TCCTTCTGGATGTTGTAGTCCGCAAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAA 741 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||| || ||| Sbjct 742 ATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTC 801 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||||| || |||| || || || || || || || |||||||| Sbjct 802 TCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACG 861 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 862 AAGATCTGCATA 873 >seq3993 Length=1029 Score = 96.9 bits (106), Expect = 2e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||| || | || | || |||||||| || || || || Sbjct 95 TCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAA 154 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||| || ||| Sbjct 155 ATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTC 214 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||||| || |||| || || || || || || | |||||||||| Sbjct 215 TCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTTAAAGTCTTCACA 274 Query 34971 AAGATCTGCATATTCG 34986 || |||||||| |||| Sbjct 275 AAAATCTGCATGTTCG 290 >seq1044 Length=4624 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || ||||||| ||| | || | || |||||||| || || || || Sbjct 903 TCCTTCTGGATATTGTAGTCCGCGAGGGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAG 844 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | || |||||||| ||||| |||||| Sbjct 843 ATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTC 784 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | |||||| || |||| || ||||| || || ||||| ||||||||| Sbjct 783 TCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACA 724 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 723 AAAATCTGCAT 713 >seq5372 Length=561 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||| || | || | || |||||||| || || || || Sbjct 81 TCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAA 140 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||| || ||| Sbjct 141 ATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTC 200 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||||| || |||| || || || || || || || |||||||| Sbjct 201 TCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACG 260 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 261 AAGATCTGCATA 272 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||| || | || | || |||||||| || || || || Sbjct 309 TCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAA 368 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||| || ||| Sbjct 369 ATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTC 428 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||||| || |||| || || || || || || || |||||||| Sbjct 429 TCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACG 488 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 489 AAGATCTGCATA 500 >seq1880 Length=2433 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||| || | || | || |||||||| || || || || Sbjct 2239 TCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAA 2298 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||| || ||| Sbjct 2299 ATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTC 2358 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||||| || |||| || || || || || || || |||||||| Sbjct 2359 TCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACG 2418 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 2419 AAGATCTGCATA 2430 >seq4543 Length=829 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||| || | || | || |||||||| || || || || Sbjct 640 TCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAA 699 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||| || ||| Sbjct 700 ATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTC 759 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||||| || |||| || || || || || || || |||||||| Sbjct 760 TCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACG 819 Query 34971 AAGATCTGCA 34980 |||||||||| Sbjct 820 AAGATCTGCA 829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324611380453248