Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1 161 2e-34 seq2451 120 6e-22 >seq1 Length=157016 Score = 161 bits (178), Expect = 2e-34 Identities = 478/726 (66%), Gaps = 32/726 (4%) Strand=Plus/Plus Query 212948 GTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCT 213007 ||||| ||| || ||| ||||||||| || ||||||||| ||||||||||| | ||| Sbjct 22139 GTAAATGTTCGACGTGAAGGGCTCGAAGCACTCGTTGTTACCCAGAATCTGAGAGGTGGA 22198 Query 213008 GGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCG 213067 ||| ||||||||||| |||| ||||| ||| | || || | ||| |||| || Sbjct 22199 GGCGGTGGGCATGGGCGCCAGGAGGAGGGAGTTACGCAACCCCTTCTCC---ATGACACG 22255 Query 213068 CCGA---AGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACAT 213124 | || | |||||| ||| | ||| | | || || ||| | ||| | Sbjct 22256 CTTCTTGAGGGCATCCCAGTTCCAGCGGCCGCTCGTGGGCT-GT--TTCTC---CCATAA 22309 Query 213125 GTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATG 213184 ||| ||||||| | || | | |||||||||| | | | ||||| || | Sbjct 22310 GTCGAACTGCAGCTTCCCCTCCGAGGCAGGGCTGCCCTTGAAGGTCTCATAGGGACCCTC 22369 Query 213185 CTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTC 213244 | ||| || || || ||| | || || || |||||||||||||| || || ||||| Sbjct 22370 CACCTCCGCGAGGTCCGTGGAGGACTCCACCGCGGCGTAGTAGATGGTCTCGAAGATCTC 22429 Query 213245 CCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATC 213304 | |||||||||| ||||| | ||||||||| | | | | || |||| Sbjct 22430 CTCATTGAGCTTCTGCGCCTCCTCGCTCGTGAAGGGGAGACGGAGGAGAATAAAGGCATC 22489 Query 213305 AGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGT---TAGACTTGGAGCA 213361 || |||||||| || || | |||||| || | ||| | | || | |||| ||| Sbjct 22490 GGCTAGCCCCTGCACGCCAAGGCCGATCGGGCGGTGGCGCTCGTTGCTCCTCTTG--GCA 22547 Query 213362 CTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTT 213421 | |||| |||||| | ||| ||| |||| ||| |||||| || | | || Sbjct 22548 GT-TTCCACGGGGTAGTAACTGCGGTCAATGACGCGGTTCAGGTTGTACGTAACGTCCTT 22606 Query 213422 GGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGC----CCCCGTCCTGCACAAACT 213477 |||||| | ||| | ||| | |||||| | || || |||| ||||||| Sbjct 22607 GGTGACCTCATAGAGGCGTTGGTGGTCGAACACCT-GCTTCTCCACGTC---GACAAACT 22662 Query 213478 CAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGC---CACCTCCTGAGAGTCTGTGTACT 213534 ||||||||| ||| |||||||| ||||| | | |||| ||| ||||||| Sbjct 22663 TGCTGAGGGCGATGGAGGCGAGGTTGCAGACGGCGGTCTCATCCTTGGAG---GTGTACT 22719 Query 213535 CCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACT 213594 | || ||||| |||||||| ||| ||| |||||| |||| |||| || || || | Sbjct 22720 CGATAATCTCCGTGCACAGATTGGAGCACTTGATGGTACCCAAATTCTTCTGATTGGATT 22779 Query 213595 TTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCA 213654 | |||| | |||||||| |||||| | ||| |||||||| |||||||| | Sbjct 22780 TCTTGTTGCAGGCGTCCTTGTACAGCATGAAAGGGACGCCGGTCTCGGTCTGGGACATGA 22839 Query 213655 GTATCT 213660 | |||| Sbjct 22840 GGATCT 22845 >seq2451 Length=1853 Score = 120 bits (132), Expect = 6e-22 Identities = 373/569 (66%), Gaps = 9/569 (2%) Strand=Plus/Minus Query 48122 TAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAG 48181 || || | ||||||||||||| |||||| || ||||| ||| |||||| |||| | Sbjct 1132 TACAGGAGGCAGGCAAAGTCCGTGTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTG 1073 Query 48182 AAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCA 48241 || || || ||||| || || | || || |||||||| || || ||| ||||| Sbjct 1072 AACGTCAGGCCGGGCATCACACCGCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCG 1013 Query 48242 GAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTC 48301 ||||||||||| |||||||| || || || | | || | ||| | | ||||| | Sbjct 1012 GAGAAGAAGATACCCTCCACGGCAGCAAAACCAATCAGGCGCTC-CTG---GAAGCTCGC 957 Query 48302 TTGTCTG-AGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTC 48360 | ||| |||||| | ||||| || ||||| |||| ||| | || ||||||| Sbjct 956 CTCGCTGCCGATCCAACGCACGGCCCACTCCGCCTTGTTCTGGATCGACGGGATCGTCTG 897 Query 48361 TATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTT 48420 || || | | |||||| ||| | ||| | | |||||| |||||| Sbjct 896 GATCGCATGCAGCAGCTTCACCTTCTCGTCATTGTCGGAGATGTAGGTATCCAGCAGCAC 837 Query 48421 TGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGC 48480 | ||| |||| ||||| | ||||| || | ||||||||||||||| || | || Sbjct 836 CGAGTAGGTCTCGGAGTGGATGTTCTCCATCATCAGCTGGAACCCGTAGAACGCGCGCGC 777 Query 48481 CTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCAT 48539 ||| | || ||| || || ||| | || ||| || |||||| | || || || | Sbjct 776 CTCGGGAATCTTCACGTCCGTCATGAAGCGCT-GAGCGAGGTTCTCAATCACGATGCCGT 718 Query 48540 CTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAG 48599 | ||||||||||||| | || | || | ||| || |||| | || || Sbjct 717 CGCTGCCAGCAAAGAAGGCCAACACGTACTTGATGAAGTGCTGCTCACCCTCCGTCAGCT 658 Query 48600 CATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGA-CGCG 48658 |||| | | ||| || |||||||| | ||||||| ||||||| | | | | Sbjct 657 TCACCCAGTCAACCAGGTCGTTCCCCAGGTCAATCTCTTCCAACGTCCAGATGCAGCTCT 598 Query 48659 AGTGCTTTTTTGTACATGCCCCATATGTC 48687 ||| | |||||| ||| ||| ||||| Sbjct 597 CCTGC-TCCTTGTACTTGCGCCAGATGTC 570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931467406397440