Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1 185 2e-41 seq2451 172 1e-37 seq170 91.5 3e-13 >seq1 Length=157016 Score = 185 bits (204), Expect = 2e-41 Identities = 526/797 (66%), Gaps = 15/797 (2%) Strand=Plus/Plus Query 221702 AGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATC 221761 ||||| | | ||| ||||| || ||||| ||| |||||| ||| |||| || ||| Sbjct 22668 AGGGCGATGGAGGCGAGGTTGCAGACGGCGGTCTCATCCTTGGAGGTGTACTCGATAATC 22727 Query 221762 TCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTG 221821 || || || || ||| |||||||||||| |||| | || ||||| || || ||| Sbjct 22728 TCCGTGCACAGATTGGAGCACTTGATGGTACCCAAATTCTTCTGATTGGATTTCTTGTTG 22787 Query 221822 GCAGCGTCCTTGTAGAGCAT-AAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTT 221880 ||||||||||| ||||| |||||||| ||| ||||| ||| | || || |||| Sbjct 22788 CAGGCGTCCTTGTACAGCATGAAAGGGAC-GCCGGTCTCGGTCTGGGACATGAGGATCTC 22846 Query 221881 GTCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGT-CTTTTCATACC 221939 ||| | || ||| ||| | || ||||||| || | || | |||||| ||| Sbjct 22847 AAACCACAAGTC-CTG-CGC-CGGAATCGTCTTGAC-GCCCATTCCCTTCTTTTCGTACT 22902 Query 221940 CGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGG 221999 | || | || |||| || ||||| ||| |||||||| ||| | || Sbjct 22903 CCTCGTACTTCCGCTCGAACTCCTCGCCGTAGCAGTCGCTCAGGCCTGTGCACACGTTGG 22962 Query 222000 GACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCC 222059 | |||||| |||| || | || ||||| | || ||||||||| || || |||| Sbjct 22963 GGTCCATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCC 23022 Query 222060 ACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGAT 222119 | || || | ||| ||||| | || || || |||||| ||| ||||| | |||| Sbjct 23023 AAAGGGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTTTCGCTTCAGGC 23082 Query 222120 CCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTC 222179 | ||||| || | ||| |||||||||||||| || || ||||| | || || | Sbjct 23083 GGACGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTAC 23142 Query 222180 GCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTA 222239 |||| ||||||||| ||||| | | ||||| | || || | || | Sbjct 23143 GCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCA 23202 Query 222240 CCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT-- 222297 | || |||||||| |||||| || || ||||| |||| | | | ||| Sbjct 23203 CGAGACCGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACCGGAAGAGCGGATGTTGT 23262 Query 222298 --ACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGA 222355 || | | || || ||||||||||| || ||| ||||||| |||||| Sbjct 23263 GAACGTGGA-AC---CCAATACCACCGGCCGCCTTACTGATGGTGGCGCACTCCTTGAGG 23318 Query 222356 GTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATC 222415 ||||| ||||| || ||| ||| ||||| | | || || || || || |||| Sbjct 23319 GTGTCGTAAATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAGGAACTCATC 23378 Query 222416 TGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTA 222475 |||| || | || || |||||| ||||| || || ||||||| |||||| | ||| Sbjct 23379 TGAGGCTTCGGGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGGTAAAGAATCCCAAG 23438 Query 222476 GACATCAGATCGTACGT 222492 ||||| |||||||| || Sbjct 23439 GACATGAGATCGTAGGT 23455 Score = 86.0 bits (94), Expect = 1e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 221113 CTTGTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAA 221172 |||||||||||| |||| || || ||||| | | ||| | ||| || ||||| Sbjct 22097 CTTGTTCACCACCGGGAACTCACCGCTCAGCACACGACGGACGTAAATGTTCGACGTGAA 22156 Query 221173 CGGTTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGC 221232 || |||| || ||||||||| ||||| ||||||| ||| ||||||||||||||| || Sbjct 22157 GGGCTCGAAGCACTCGTTGTTACCCAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGCGC 22216 Query 221233 CACCAGCAGACTGTTGCGCA 221252 || || || ||| |||| Sbjct 22217 CAGGAGGAGGGAGTTACGCA 22236 >seq2451 Length=1853 Score = 172 bits (190), Expect = 1e-37 Identities = 522/804 (65%), Gaps = 11/804 (1%) Strand=Plus/Plus Query 25522 GAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAG 25581 ||||||||||| |||| || ||| ||| | |||| || | | | |||||| Sbjct 618 GAAGAGATTGACCTGGGGAACGACCTGGTTGACTGGGTGAAGCTGACGGAGGGTGAGCAG 677 Query 25582 CATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAAT 25641 || || |||||||||||||||| |||||||| | | || || || |||| ||||| Sbjct 678 CACTTCATCAAGTACGTGTTGGCCTTCTTTGCTGGCAGCGACGGCATCGTGATTGAGAAC 737 Query 25642 CTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGC-CAAGTGTTTCTACGGTTT 25700 || || | |||| | ||| ||| || ||||| | | ||| |||||| || Sbjct 738 CTCGCTCAGCGCTTCATGACGGACGTGAAGATTCCCGAGGCGCGCGCGTT-CTACGGGTT 796 Query 25701 CCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACAT 25760 |||| || || || || | ||||| ||| || | ||| ||| || ||||| Sbjct 797 CCAGCTGATGATGGAGAACATCCACTCCGAGACCTACTCGGTGCTGCTGGATACCTACAT 856 Query 25761 TACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAA 25820 | ||| | ||||| | |||| | ||| ||| || || || ||| | Sbjct 857 CTCCGACAATGACGAGAAGGTGAAGCTGCTGCATGCGATCCAGACGATCCCGTCGATCCA 916 Query 25821 GAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCG 25880 || |||||| ||||||| || |||||| |||| || || | || ||||| Sbjct 917 GAACAAGGCGGAGTGGGCCGTGCGTTGGATCGGCAGCGAG---GCGAGCTTCCAGGAGCG 973 Query 25881 GCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCT 25939 ||| | | |||||||| |||||||| ||||| ||| ||| || || |||| |||||| Sbjct 974 CCTGATTGGTTTTGCTGCCGTGGAGGGTATCTTCTTCTCCGGCTCCTTCTGCG-CCATCT 1032 Query 25940 TCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCA 25999 ||||||| ||| || || |||||||| ||| || ||||||||||| | Sbjct 1033 TCTGGCTGAAGAAGCGCGGTGTGATGCCCGGCCTGACGTTCAGTAACGAGCTCATTTCCC 1092 Query 26000 GGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACA 26059 | ||||||||||| |||| || ||||||||||| || |||| ||||| | |||| Sbjct 1093 GCGACGAGGGTCTGCACACGGACTTTGCCTGCCTCCTGTACAACAGCCACATCAAGCACA 1152 Query 26060 AACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGT 26119 | | | | || ||| | ||||||| || ||||| | |||||||||||||| Sbjct 1153 AGCTGCCCCGCGAACGCGTGCTGAACATCATCACGGACGCTGTTGCGATCGAGAAGGAGT 1212 Query 26120 TTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGA-CTCATGAGCCAA 26178 | | ||||||||| | || || |||||||| Sbjct 1213 TCATCTGCGAGTCGCTGCCCGTGCGCCTGATTGGCATGAAC-GCGGACCTGATGAGCCAG 1271 Query 26179 TACATTGAGTATGTGGCCGACCATCTGC-TGTGCCAGCTGGGACTCGCCAGACTCTACAG 26237 |||||||||| ||| || |||| ||||| ||| | || || | | | |||| | Sbjct 1272 TACATTGAGTTTGTTGCGGACCGTCTGCTTGTTTC-CCTCGGTGAGGAGAAGCACTACGG 1330 Query 26238 TACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTT 26297 | || | ||||| || ||||| ||||| | || || ||| || ||||||||||| || Sbjct 1331 TGCGACGAACCCTTTTGACTTCATGGAGATGATTTCCTTGACCGGTAAGACCAACTTTTT 1390 Query 26298 TGAAAAGAGGGTCGGCGACTATCA 26321 || |||| ||| || || || || Sbjct 1391 CGATAAGAAGGTTGGTGAGTACCA 1414 >seq170 Length=23694 Score = 91.5 bits (100), Expect = 3e-13 Identities = 222/340 (65%), Gaps = 4/340 (1%) Strand=Plus/Plus Query 25984 AACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACG 26043 ||||||||||| | | || |||||||| |||| || ||||||||||| || |||| Sbjct 11 AACGAGCTCATTTCCCGCGATGAGGGTCTGCACACGGACTTTGCCTGCCTCCTGTACAAC 70 Query 26044 GGCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTG 26103 ||||| | ||||| | | | || ||| | ||||||| || ||||| Sbjct 71 AGCCACATCAAGCACAAGCTGCCCCGCGAACGCGTGCTGAACATCATCACGGACGCTGTT 130 Query 26104 GAGATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAAC 26163 | ||||||||||||||| | ||||||||| | Sbjct 131 GCGATCGAGAAGGAGTTCATCTGCGAGTCGCTGCCCGTGCGCCTGATTGGCATGAACG-C 189 Query 26164 AGAC-TCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGAC 26221 ||| | |||||||| |||||||||| ||| || |||| |||||| || | || || Sbjct 190 GGACCTGATGAGCCAGTACATTGAGTTTGTTGCGGACCGTCTGCTTGTTTCC-CTCGGTG 248 Query 26222 TCGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAG 26281 | | | |||| || || | ||||| || ||||| ||||| | || || ||| | Sbjct 249 AGGAGAAGCACTACGGTGCGACGAACCCTTTTGACTTCATGGAGATGATTTCCTTGACCG 308 Query 26282 GGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 | ||||||||||| || ||||||| ||| || || ||||| Sbjct 309 GTAAGACCAACTTTTTCGAAAAGAAGGTTGGTGAGTATCA 348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928779595095040