Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1 170 2e-37 seq2451 118 1e-21 >seq1 Length=157016 Score = 170 bits (188), Expect = 2e-37 Identities = 464/709 (65%), Gaps = 11/709 (2%) Strand=Plus/Minus Query 75887 ATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAAC 75946 || |||| || ||||| ||||| || || | ||||| |||||||| || || ||| Sbjct 22843 ATCCTCATGTCCCAGACCGAGACCGGCGTCCCTTTCATGCTGTACAAGGACGCCTGCAAC 22784 Query 75947 AAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATT 76006 ||||| || || ||||||||||| || |||||| |||| ||||| |||||||| ||| Sbjct 22783 AAGAAATCCAATCAGAAGAATTTGGGTACCATCAAGTGCTCCAATCTGTGCACGGAGATT 22724 Query 76007 TTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCA 76066 | |||||||| ||||||||||| || || ||||| | || || |||||||| Sbjct 22723 ATCGAGTACACCTCCAAGGATGAGACCGCCGTCTGCAACCTCGCCTCCATCGCCCTCAGC 22664 Query 76067 AAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAG 76126 |||| |||| | | |||| | || || | || || |||| |||| ||| Sbjct 22663 AAGTTTGTCGACGTGGAGAAGCAGGTGTTCGACCACCAACGCCTCTATGAGGTCACCAAG 22604 Query 76127 ATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCG 76186 ||||| | || || ||||| ||||||||| | | || || ||||| || ||||| Sbjct 22603 GACGTTACGTACAACCTGAACCGCGTCATTGACCGCAGTTACTACCCCGTGGAAACTGCC 22544 Query 76187 CGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTA 76246 | | || ||| ||| | || || || | || || || || || || |||| Sbjct 22543 AAGAGGAGCAACGAGCGCCACCGCCCGATCGGCCTTGGCGTGCAGGGGCTAGCCGATGCC 22484 Query 76247 TTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATC 76306 |||||| | ||| | | || || || || || || | |||| ||| Sbjct 22483 TTTATTCTCCTCCGTCTCCCCTTCACGAGCGAGGAGGCGCAGAAGCTCAATGAGGAGATC 22424 Query 76307 TTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGT 76366 || || ||||| || |||| | ||||| | || | || || | | ||| Sbjct 22423 TTCGAGACCATCTACTACGCCGCGGTGGAGTCCTCCACGGACCTCGCGGAGGTGGAGGGT 22364 Query 76367 TCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGG 76426 |||||||||| || |||| || || || | ||| ||| ||||| || | ||| Sbjct 22363 CCCTATGAGACCTTCAAGGGCAGCCCTGCCTCGGAGGGGAAGCTGCAGTTCGACTTATGG 22304 Query 76427 GAAGGTGAAAC------CAAGC-TCAACTACGACTGGGATGTTCTCAAGGAACGCATCAA 76479 || ||||| | ||| | || ||||||||| |||||| | || ||| Sbjct 22303 GA----GAAACAGCCCACGAGCGGCCGCTGGAACTGGGATGCCCTCAAGAAGCGTGTCAT 22248 Query 76480 GGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACA 76539 ||||||||| | |||||| || | |||| || ||||| || ||||||||| | || Sbjct 22247 GGAGAAGGGGTTGCGTAACTCCCTCCTCCTGGCGCCCATGCCCACCGCCTCCACCTCTCA 22188 Query 76540 AATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588 || ||||||| || || ||||| || || | ||| | ||||| ||| Sbjct 22187 GATTCTGGGTAACAACGAGTGCTTCGAGCCCTTCACGTCGAACATTTAC 22139 >seq2451 Length=1853 Score = 118 bits (130), Expect = 1e-21 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 65077 GAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCT 65136 |||||||| ||| ||||| ||||||||||||||||||||||| || |||||||| Sbjct 969 GAGCGCCTGATTGGTTTTGCTGCCGTGGAGGGTATCTTCTTCTCCGGCTCCTTCTGCGCC 1028 Query 65137 ATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATT 65196 || | ||| |||||||||| ||| | ||||| ||||| ||| || || || ||| Sbjct 1029 ATCTTCTGGCTGAAGAAGCGCGGTGTGATGCCCGGCCTGACGTTCAGTAACGAGCTCATT 1088 Query 65197 TCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 ||||| || |||||||| ||| ||| |||||| Sbjct 1089 TCCCGCGACGAGGGTCTGCACACGGACTTTGCC 1121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596527720814080