Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1 104 7e-17 >seq1 Length=157016 Score = 104 bits (114), Expect = 7e-17 Identities = 495/778 (64%), Gaps = 13/778 (2%) Strand=Plus/Plus Query 155571 ACAAACATACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG 155630 |||||| | | || | || || || || || || || || ||||| | | | | || Sbjct 22656 ACAAACTTGCTGAGGGCGATGGAGGCGAGGTTGCAGACGGCGGTCTCATCCTTGGAGGTG 22715 Query 155631 TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTA 155690 || || | |||||| |||||| || || | ||||||||| || ||||||||||| || Sbjct 22716 TACTCGATAATCTCCGTGCACAGATTGGAGCACTTGATGGTACCCAAATTCTTCTGATTG 22775 Query 155691 GATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCG 155750 ||||| |||| || || |||||||| || ||| | ||| || ||||| |||| | Sbjct 22776 GATTTCTTGTTGCAGGCGTCCTTGTACAGCATGAAAGGGACGCCGGTCTCGGTCTGGGAC 22835 Query 155751 TCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGAC 155810 || |||| | ||| | ||| | || ||| |||| | | || | | Sbjct 22836 ATGAGGATCTCAAACCACAAGTCCTGCGCCGGAATCGTCTTGACGCCCATTCCCTTCTTT 22895 Query 155811 TCATATTTCATATAC-AGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCA 155869 || || | | ||| || || | | ||||| ||||| || || ||||| || | ||| Sbjct 22896 TCGTACTCCTCGTACTTCCGCTC-GAACTCCTCGCCGTAGCAGTCGCTCAGGCCTGTGCA 22954 Query 155870 CTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATC 155929 | | |||| | ||||| ||| | | | | ||||||| ||| || | ||| Sbjct 22955 CACGTTGGGGTCCATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATC 23014 Query 155930 ACTCGCCCAAATAGCATAGAAAAGGTCCCTTGC-CTTTGACTCCTCATCGCC-GTGATT- 155986 | ||||| || || || || || | || | ||| ||||| | || ||| || Sbjct 23015 AGGAATCCAAAGGGCGTAAAACAGATCGCGGGCACGTTG-GTCCTCCTTACCGGTGTTTC 23073 Query 155987 -CTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045 |||| || | ||| || | || | || ||||| || |||| || | Sbjct 23074 GCTTC---AGGCGGACGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGA 23130 Query 156046 AACTACCATTCCTCTT---GCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102 | ||| || | ||| ||||||||| || || || || || || |||||||| |||| Sbjct 23131 AGGCACCCTTACGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACAC 23190 Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162 ||||| || | | ||| ||||| || || || || ||| || | ||| || | Sbjct 23191 GGAGCATGGGCACGAGACCGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACCGGAAG 23250 Query 156163 AGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATT 156222 |||| | || |||| || | ||||||||||| | | ||| || ||||| | Sbjct 23251 AGCGGATGTTGTGAACGTGGAACCCAATACCACCGGCCGCCTTACTGATGGTGGCGCACT 23310 Query 156223 CCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACG 156282 |||| | || | | |||| || || ||| || || | ||| | | || |||| | Sbjct 23311 CCTTGAGGGTGTCGTAAATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAGG 23370 Query 156283 AACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAA 156340 |||| | ||||| || || || |||||||| || ||||| || || || |||| Sbjct 23371 AACTCATCTGAGGCTTCGGGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGGTAAA 23428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471711695364592