Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1 152 6e-31 seq2451 143 3e-28 seq170 143 3e-28 >seq1 Length=157016 Score = 152 bits (168), Expect = 6e-31 Identities = 224/317 (71%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| |||||||| || |||| || || || ||||||||||||||||| |||||||| Sbjct 23156 CTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAGACCGTTGGA 23215 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||| || || || | ||| |||| | ||| | ||||| || || || Sbjct 23216 GGTACCGTTCGTACCGGCGATGTAACTACCGGAAGAGCGGATGTTGTGAACGTGGAACCC 23275 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || ||||||| ||| |||| ||||||| ||||| |||||||| ||||| || Sbjct 23276 AATACCACCGGCCGCCTTACTGATGGTGGCGCACTCCTTGAGGGTGTCGTAAATGCCATC 23335 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||| |||| |||||||| ||||||| ||||| || | || || | || || || Sbjct 23336 GATACTGTCGTCCTTCATGGCCACGAGGAAGCAGGAACTCATCTGAGGCTTCGGGGTACC 23395 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||||||||| || || || || || ||| || || | |||||| |||||||| Sbjct 23396 GGCGTTGAACAGGGTAGGGGTGGCGTGGGTAAAGAATCCCAAGGACATGAGATCGTAGGT 23455 Query 1630365 GGCGAGCACGCGCGCCA 1630381 | | | | |||| ||| Sbjct 23456 GCGGCGAATGCGCTCCA 23472 Score = 125 bits (138), Expect = 9e-23 Identities = 363/553 (66%), Gaps = 18/553 (3%) Strand=Plus/Plus Query 1626985 TCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCCGGTC 1627044 ||||||||||||| ||| ||||| || ||||| | |||||| || ||||||||||| ||| Sbjct 21756 TCGACGGTAAACTTGATCGCGTCCGCAGCGGGACGGGTGCGGAGGTAGTACATGCCCGTC 21815 Query 1627045 TTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGCGTCG 1627104 || || || |||| || | |||||| || ||||| || ||| | | | Sbjct 21816 TTCAGTCCAGACTGCCAGCAGTGGAAGTGCATGGAGGTGATACGGCCGGAGGAGGGGCTC 21875 Query 1627105 GCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCGCCATG 1627164 || ||| ||||| | ||||| |||||| | ||| ||||| | || ||||| Sbjct 21876 TCGAGGTAGAGGTTCATGGACTGCGACTGGTCAATATACTTGGCGCGGGCCGCGGCCATA 21935 Query 1627165 TCGAT--GGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGTCG- 1627221 ||||| | ||| || | || | |||||||||||| | ||| |||||| |||| Sbjct 21936 TCGATCAGCTGA--CGCTGGGAGATCTCCCACACGGTGCGGTAGAGCTCCTTGATGTCGT 21993 Query 1627222 -GGCGGCACCTCGTCGTCGCCAAAGCCCTGC-ACCGAGCCGTGCGCCGCGACGAGCCTGT 1627279 || | ||| ||||| | || || || ||||||| | || || || Sbjct 21994 CGGGGATACC-------CGCCACA--CCAGCGACGGAGCCGTTGAAGGTGATGATTTCGT 22044 Query 1627280 CGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCAGGCGCTTGACCAGGTGGCGGTTGA 1627339 || | || |||||||| |||| || ||| | | || || | ||| | Sbjct 22045 TACGGATCTCATCGTTCCACAGGTTGCGCTTGATGAGGTCCATCACGAGATACTTGTTCA 22104 Query 1627340 CCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGACCTCGC 1627399 |||| | || || || ||||| || || ||| ||||| |||| | |||| Sbjct 22105 CCACCGGGAACTCACCGCTCAGCACACGACGGACGTAAATGTTCGACGTGAAGGGCTCGA 22164 Query 1627400 ACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGGA 1627459 | |||| |||| ||||| ||||| || || | ||| ||||||||| |||||| ||||| Sbjct 22165 AGCACTCGTTGTTACCCAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGCGCCAGGAGGA 22224 Query 1627460 GCGAGTTGCGCAGGCCGTGCTGTCGAACTAGCGCGCGCAGCGCGTCCCAGTCCCAGCGGC 1627519 | ||||| |||| || | || || || || || ||||||| |||||||| Sbjct 22225 GGGAGTTACGCAACCCCTTCTCCATGACACGCTTCTTGAGGGCATCCCAGTTCCAGCGGC 22284 Query 1627520 CGCTCTCGTGGGC 1627532 || ||||||||| Sbjct 22285 CG--CTCGTGGGC 22295 Score = 91.5 bits (100), Expect = 2e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507 ||| ||||| ||| |||| || |||||||| || ||||| || || | |||||||| Sbjct 23003 CATGAAGAGATCAGGAATCCAAAGGGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTT 23062 Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567 ||| ||| || ||| || | |||| | |||||||||||||||||| ||||| Sbjct 23063 ACCGGTGTTTCGCTTCAGGCGGACGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTA 23122 Query 1628568 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 ||| ||||| ||||| ||||| ||||| || Sbjct 23123 CACGGCGAAGGCACCCTTACGCTTACCGCCACC 23155 >seq2451 Length=1853 Score = 143 bits (158), Expect = 3e-28 Identities = 216/300 (72%), Gaps = 14/300 (5%) Strand=Plus/Minus Query 868718 TCGAAAAAGTTGGTCTTGCCC-TCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGG 868776 ||||||||||||||||| || || || || |||| |||||| | || ||||| | Sbjct 1393 TCGAAAAAGTTGGTCTTACCGGTCAAG-GAAATCATCTCCATGAAGTCAAAAGGGTTCGT 1335 Query 868777 CGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGAT 868836 || ||||||||| || ||||| || | ||||| ||||| || |||||||| || Sbjct 1334 CGCACCGTAGTGCTTCTCCTCACCGAGGGAAACAAGCAGACGGTCCGCAACAAACTCAAT 1275 Query 868837 GTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCAC 868896 |||||||| ||| ||| | ||||||||||| || || ||| ||||||||||||| | Sbjct 1274 GTACTGGCTCATCAGGTCCGCGTTCATGCCAATCAGGCGCACGGGCAGCGACTCGCAGAT 1215 Query 868897 AAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGCCTGGGCACGTCGGCCGAGG- 868955 ||||| ||||||||| | || || || |||||| | | ||||| || || || Sbjct 1214 GAACTCCTTCTCGATCGCAACAGCGTCCGTGATGATGT---TCAGCACG-CGTTCGCGGG 1159 Query 868956 ---GCTTG---TTGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAGTGCA-ACCCT 869008 ||||| |||| | | | |||| || |||||||||||||| ||||| ||||| Sbjct 1158 GCAGCTTGTGCTTGATGTGGCTGTTGTACAGGAGGCAGGCAAAGTCCGTGTGCAGACCCT 1099 Score = 120 bits (132), Expect = 4e-21 Identities = 204/296 (69%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || | |||||| ||||| || || | | |||| | | | Sbjct 823 GAGTGGATGTTCTCCATCATCAGCTGGAACCCGTAGAACGCGCGCGCCTCGGGAATCTTC 764 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || ||| ||||||| || || |||||||| |||||||||||||||| | || || Sbjct 763 ACGTCCGTCATGAAGCGCTGAGCGAGGTTCTCAATCACGATGCCGTCGCTGCCAGCAAAG 704 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || |||| |||| |||||| ||||| |||| | || | ||| |||||||| || Sbjct 703 AAGGCCAACACGTACTTGATGAAGTGCTGCTCACCCTCCGTCAGCTTCACCCAGTCAACC 644 Query 869813 GTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTAC 869872 |||| | ||||| | ||| || |||||||| || ||| || |||||| Sbjct 643 AGGTCGTTCCCCAGGTCAATCTCTTCCAACGTCCAGATGCAGCTCTCCTGCTCCTTGTAC 584 Query 869873 ATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTC 869928 | ||| | | ||||| |||| ||||| || || ||||||| |||||| || Sbjct 583 TTGCGCCAGATGTCGTGGTACTGGATCGGGAACAGCACGAAGCGGTAGGGGTTCTC 528 Score = 118 bits (130), Expect = 1e-20 Identities = 198/285 (69%), Gaps = 6/285 (2%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| |||||||| || | ||||| || || | ||||||||||| | |||||||| Sbjct 1103 ACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACCGCGCTT 1044 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| ||||| |||||||||||||| ||| ||||| ||||| ||||| ||||| ||||| Sbjct 1043 CTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGCAGCAAA 984 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 || || || ||||| ||| ||| |||| || |||||| || ||||| Sbjct 983 ACCAATCAGGCGCTCCTGGAAG--CTCG----CCTCGCTGCCGATCCAACGCACGGCCCA 930 Query 869359 GTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTC 869418 || ||||| ||| | |||||| | ||| | ||| || | | || | |||| || Sbjct 929 CTCCGCCTTGTTCTGGATCGACGGGATCGTCTGGATCGCATGCAGCAGCTTCACCTTCTC 870 Query 869419 GGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | | ||| || ||||| || | ||| | ||| |||||||| Sbjct 869 GTCATTGTCGGAGATGTAGGTATCCAGCAGCACCGAGTAGGTCTC 825 >seq170 Length=23694 Score = 143 bits (158), Expect = 3e-28 Identities = 216/300 (72%), Gaps = 14/300 (5%) Strand=Plus/Minus Query 868718 TCGAAAAAGTTGGTCTTGCCC-TCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGG 868776 ||||||||||||||||| || || || || |||| |||||| | || ||||| | Sbjct 327 TCGAAAAAGTTGGTCTTACCGGTCAAG-GAAATCATCTCCATGAAGTCAAAAGGGTTCGT 269 Query 868777 CGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGAT 868836 || ||||||||| || ||||| || | ||||| ||||| || |||||||| || Sbjct 268 CGCACCGTAGTGCTTCTCCTCACCGAGGGAAACAAGCAGACGGTCCGCAACAAACTCAAT 209 Query 868837 GTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCAC 868896 |||||||| ||| ||| | ||||||||||| || || ||| ||||||||||||| | Sbjct 208 GTACTGGCTCATCAGGTCCGCGTTCATGCCAATCAGGCGCACGGGCAGCGACTCGCAGAT 149 Query 868897 AAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGCCTGGGCACGTCGGCCGAGG- 868955 ||||| ||||||||| | || || || |||||| | | ||||| || || || Sbjct 148 GAACTCCTTCTCGATCGCAACAGCGTCCGTGATGATGT---TCAGCACG-CGTTCGCGGG 93 Query 868956 ---GCTTG---TTGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAGTGCA-ACCCT 869008 ||||| |||| | | | |||| || |||||||||||||| ||||| ||||| Sbjct 92 GCAGCTTGTGCTTGATGTGGCTGTTGTACAGGAGGCAGGCAAAGTCCGTGTGCAGACCCT 33 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106678324740272