Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1 125 6e-24 seq1044 105 6e-18 seq587 105 6e-18 seq1880 98.7 9e-16 seq4543 96.9 3e-15 seq5372 95.1 1e-14 seq4373 89.7 5e-13 seq3993 89.7 5e-13 >seq1 Length=157016 Score = 125 bits (138), Expect = 6e-24 Identities = 752/1197 (63%), Gaps = 35/1197 (3%) Strand=Plus/Plus Query 138451 ATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACC 138510 || |||||||| |||| || |||||| | ||| | | ||||| |||| | ||| Sbjct 22050 ATCTCATCGTTCCACAGGTTGCGCTTGATGAGGTCCATCACGAGATACTTGTTCACCACC 22109 Query 138511 TGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGAT 138570 | || |||||| || || ||||| ||||||||||| ||||| ||||| || | Sbjct 22110 GGGAACTCACCGCTCAGCACACGACGGACGTAAATGTTCGACGTGAAGGGCTCGAAGCAC 22169 Query 138571 TCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAA 138630 |||||||| ||||||||||||| |||| ||||| |||||| ||||| | || || Sbjct 22170 TCGTTGTTACCCAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGCGCCAGGAGGAGGGAG 22229 Query 138631 TTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGC-- 138688 || || || || | | ||| || | |||||| | ||||| ||| ||| Sbjct 22230 TTACGCAACCCCTTCTCCATGACACGCTTCTTGAGGGCATCCCAGTTCCAGCGGCCGCTC 22289 Query 138689 -TAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCG 138747 | || | ||| | ||| | ||| |||| | | | ||| || || ||||| | | Sbjct 22290 GTGGGCTGTTTCTCCCATAAGTCGAACTGCAGCTTCCCCTCCGAGGCAGGGCTGCCCTTG 22349 Query 138748 TACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAG 138807 | | || || ||| | | | ||| | || || | ||| | ||| | ||| Sbjct 22350 AAGGTCTCATAGGGACCCTCCACCTCCGCGAGGTCCGTGGAGGACTCCACCGCGGCGTAG 22409 Query 138808 TAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATG 138867 || || || ||| |||| || ||||||| | ||||| ||||| | | || | Sbjct 22410 TAGATGGTCTCGAAGATCTCCTCATTGAGCTTCTGCGCCTCCTCGCTCGTGAAGGGGAGA 22469 Query 138868 CGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGC 138927 ||||| | | || || ||||| ||||| |||||||| | |||| ||||| |||||| Sbjct 22470 CGGAGGAGAATAAAGGCATCGGCTAGCCCCTGCACGCCAAGGCCGATCGGGCGGTGGCGC 22529 Query 138928 AGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTTTAAA 138987 || | || || | ||| | || || || | || |||| ||| | Sbjct 22530 TCGTTGCTCCTCTTGGCAGTTTCCACGGGGTAGTAACTGCGGTCAATGACGCGGTTCAGG 22589 Query 138988 TTTCGCACG--ACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGT 139045 || | ||| || |||| || | | | |||| ||| | | || | Sbjct 22590 TT--GTACGTAACGTCCTTGGTGACCTCATAGAGGCGTTGGTGGTCGAA----CACCTGC 22643 Query 139046 TGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCA 139105 | || | ||||||||||| ||| ||| || ||||| | |||||| || || Sbjct 22644 T-TC----TCCACGTCGACAAACTTGCTGAGGGCGATGGAGGCGAGGTTGCAGACGGCGG 22698 Query 139106 CTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTAC 139165 || || | | |||| |||| ||| || | |||| ||| |||||||| |||| Sbjct 22699 TCTCATCCTTGGAGGTGTACTCGATAATCTCCGTGCACAGATTGGAGCACTTGATGGTAC 22758 Query 139166 CTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGC 139225 | ||||| | |||||| ||| ||| || || || ||||| ||||| | || || Sbjct 22759 CCAAATTCTTCTGATTGGATTTCTTGTTGCAGGCGTCCTTGTACAGCATGAAAGGGACGC 22818 Query 139226 CAGTTTCCACTTGTGTCTCTATAATGAATTTGA---ACAAGTCCCTAGCTTGTAT----T 139278 | || || || | | || | || | | |||||||| || | || | Sbjct 22819 CGGTCTCGGTCTGGGAC---ATGAGGATCTCAAACCACAAGTCCTGCGCCGGAATCGTCT 22875 Query 139279 TGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCG-TCGAATCGTTCACC 139337 |||||| | | ||| | ||||||| ||||| | || ||||| || || Sbjct 22876 TGACGCCCATTCCCTTCTT----TTCGTACTCCTCGTA-CTTCCGCTCGAACTCCTCGCC 22930 Query 139338 GTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGC 139397 |||| ||| || | ||| || || ||| |||| ||| || | | | Sbjct 22931 GTAGCAGTCGCTCAGGCCTGTGCACACGTTGGGGTCCATCAGCGTCCACTGTCCCTCCTC 22990 Query 139398 CTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTT 139457 |||||| ||| ||||||| ||||| |||||||| | ||| | | || |||||| || Sbjct 22991 CTTGACACGCTTCATGAAGAGATCAGGAATCCAAAGGGCGTAAAACAGATCGCGGGCACG 23050 Query 139458 CTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCA 139517 | || ||| ||| |||| || |||| | | ||| || || ||||| |||||||| Sbjct 23051 TTGGTCCTCCTTACCGGTGTTTCGCTTCAGGCGGACGAACTCGAACACGTCGGCGTGCCA 23110 Query 139518 TGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTT---GCCACCTTGATCGACGTGTCG 139574 || || || || | ||| | || || || || || |||||| || || |||| || Sbjct 23111 CGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTTACCGCCACCCTGGTCCACGTAGCG 23170 Query 139575 TACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT 139631 | | |||||||| || || | ||| ||| | |||||| | | || ||||| || Sbjct 23171 GGCGGTGTTATTGAACACACGGAGCATGGGCACGAGACCGTTGGAGGTACCGTTCGT 23227 >seq1044 Length=4624 Score = 105 bits (116), Expect = 6e-18 Identities = 169/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || || |||||||| || || | ||||| || || |||| | Sbjct 713 ATGCAGATTTTTGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGCCAGC 772 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || || || || || Sbjct 773 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCAG 832 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||||||||| | | | | | || || || Sbjct 833 CAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACCCTCGCGGACTACAAT 892 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943 || || ||||| || || || ||| | ||| | || ||||||| || | | ||||| Sbjct 893 ATCCAGAAGGAGTCCACCCTCCACCTCGTGCTCCGCCTGCGCGGTGGTGTCATGGAGCCC 952 Query 24944 ACG 24946 ||| Sbjct 953 ACG 955 >seq587 Length=8987 Score = 105 bits (116), Expect = 6e-18 Identities = 169/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || |||||||| || || | ||||| || || |||| | Sbjct 1685 ATGCAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGCCAGC 1744 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || || || || || Sbjct 1745 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCAG 1804 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||||||||| | | | | | || || ||| Sbjct 1805 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGAGGGCCGCACCCTCGCCGACTACAAC 1864 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943 || || ||||| || || || ||| | ||| | || ||||||| || | | ||||| Sbjct 1865 ATCCAGAAGGAGTCCACCCTCCACCTCGTGCTCCGCCTGCGCGGTGGTGTCATGGAGCCC 1924 Query 24944 ACG 24946 ||| Sbjct 1925 ACG 1927 >seq1880 Length=2433 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || ||| | ||||| || || || | | Sbjct 2429 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 2370 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || ||||| || || Sbjct 2369 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 2310 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || || || || || ||||||||||| | | | | || || ||| Sbjct 2309 CAGCGTCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 2250 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || ||| | ||| | || |||| || || Sbjct 2249 ATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGTGGCGG 2203 >seq4543 Length=829 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 |||||||||| | || ||||| ||||| || || ||| | ||||| || || || | || Sbjct 829 TGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGCG 770 Query 24765 ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 |||| | || | || || |||||||| ||||| || || || ||||| || || | Sbjct 769 ACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGC 710 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884 | ||| | || || || || || ||||||||||| | | | | || || |||| Sbjct 709 AGCGTCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAACA 650 Query 24885 TTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | || ||||| ||||| || ||| | ||| | || |||| || || Sbjct 649 TCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGTGGCGG 604 >seq5372 Length=561 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || ||| | ||||| || || || | | Sbjct 271 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 212 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || ||||| || || Sbjct 211 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 152 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | || || || || || ||||||||||| | | | | || || ||| Sbjct 151 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 92 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || ||| | ||| | || |||| || || Sbjct 91 ATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGTGGCGG 45 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || ||| | ||||| || || || | | Sbjct 499 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 440 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || ||||| || || Sbjct 439 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 380 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | || || || || || ||||||||||| | | | | || || ||| Sbjct 379 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 320 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || ||| | ||| | || |||| || || Sbjct 319 ATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGTGGCGG 273 >seq4373 Length=891 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || ||| | ||||| || || || | | Sbjct 872 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 813 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 812 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAG 753 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | || || || || || ||||||||||| | | | | || || ||| Sbjct 752 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTTGCGGACTACAAC 693 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || ||| | ||| | || |||| || || Sbjct 692 ATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGTGGCGG 646 >seq3993 Length=1029 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || ||||||| || || ||| | ||||| || || || | | Sbjct 285 ATGCAGATTTTTGTGAAGACTTTAACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC 226 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 225 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAG 166 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | || || || || || ||||||||||| | | | | || || ||| Sbjct 165 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 106 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || ||| | ||| | || ||||||| || Sbjct 105 ATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGCGGCGG 59 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449866017188480