Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq170 159 5e-33 seq2451 158 2e-32 seq1 116 6e-20 >seq170 Length=23694 Score = 159 bits (176), Expect = 5e-33 Identities = 236/330 (72%), Gaps = 11/330 (3%) Strand=Plus/Minus Query 793893 ACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCC-TCGAG 793951 || || ||||| |||||| || || | ||||||||||||||||| || || || Sbjct 360 ACACCAGCCTTCTGATACTCACCAACCTTCTTTTCGAAAAAGTTGGTCTTACCGGTCAAG 301 Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011 || |||| |||||| | || ||||| | || |||||||||||| ||||| Sbjct 300 -GAAATCATCTCCATGAAGTCAAAAGGGTTCGTCGCACCGTAGTGCTTCTCCTCACCGAG 242 Query 794012 CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCAT 794071 || ||||||| ||||| || || || ||||||||||||| ||| ||| | |||||||| Sbjct 241 GGAAACAAGCAGACGGTCCGCAACAAACTCAATGTACTGGCTCATCAGGTCCGCGTTCAT 182 Query 794072 GCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTC 794131 ||| || || ||||||||||||||||| || ||||| ||||||||| | || || || Sbjct 181 GCCAATCAGGCGCACGGGCAGCGACTCGCAGATGAACTCCTTCTCGATCGCAACAGCGTC 122 Query 794132 GATGATGATCTGCCTGGGCACG---TCGGACGACGGCTTG---TCGACGAGCATCGTGTA 794185 ||||||| | | ||||| ||| | | ||||| | || | | | |||| Sbjct 121 CGTGATGATGT---TCAGCACGCGTTCGCGGGGCAGCTTGTGCTTGATGTGGCTGTTGTA 65 Query 794186 GAGCAGGCAGGCAAAGTCGCAATGCAGACC 794215 || |||||||||||||| |||||||| Sbjct 64 CAGGAGGCAGGCAAAGTCCGTGTGCAGACC 35 >seq2451 Length=1853 Score = 158 bits (174), Expect = 2e-32 Identities = 216/297 (73%), Gaps = 11/297 (4%) Strand=Plus/Minus Query 793926 TCGAAAAAGTTGGTCTTGCCC-TCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984 ||||||||||||||||| || || || || |||| |||||| | || ||||| | Sbjct 1393 TCGAAAAAGTTGGTCTTACCGGTCAAG-GAAATCATCTCCATGAAGTCAAAAGGGTTCGT 1335 Query 793985 CGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAAT 794044 || |||||||||||| ||||| || ||||||| ||||| || || || ||||| Sbjct 1334 CGCACCGTAGTGCTTCTCCTCACCGAGGGAAACAAGCAGACGGTCCGCAACAAACTCAAT 1275 Query 794045 GTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGAC 794104 |||||||| ||| ||| | ||||||||||| || || ||||||||||||||||| || Sbjct 1274 GTACTGGCTCATCAGGTCCGCGTTCATGCCAATCAGGCGCACGGGCAGCGACTCGCAGAT 1215 Query 794105 AAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACG---TCGGACGA 794161 ||||| ||||||||| | || || || ||||||| | | ||||| ||| | Sbjct 1214 GAACTCCTTCTCGATCGCAACAGCGTCCGTGATGATGT---TCAGCACGCGTTCGCGGGG 1158 Query 794162 CGGCTTG---TCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAATGCAGACC 794215 | ||||| | || | | | |||| || |||||||||||||| |||||||| Sbjct 1157 CAGCTTGTGCTTGATGTGGCTGTTGTACAGGAGGCAGGCAAAGTCCGTGTGCAGACC 1101 Score = 129 bits (142), Expect = 9e-24 Identities = 226/326 (69%), Gaps = 10/326 (3%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| |||||||| || | ||||| || || ||||||||||| | |||||||| Sbjct 1103 ACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACCGCGCTT 1044 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||| ||||| |||||||| ||||| ||| ||||| ||||| ||||| ||||| ||||| Sbjct 1043 CTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGCAGCAAA 984 Query 794460 GCCGACGAGCCGCTC--GGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCC 794517 || | || ||||| || ||| || |||| || |||||| || ||| Sbjct 983 ACCAATCAGGCGCTCCTGG---AAG-CTC----GCCTCGCTGCCGATCCAACGCACGGCC 932 Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTC 794577 ||||| ||||| ||| | ||| || | ||| | ||| || | | || | ||||| Sbjct 931 CACTCCGCCTTGTTCTGGATCGACGGGATCGTCTGGATCGCATGCAGCAGCTTCACCTTC 872 Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637 ||| | ||| || |||||| || | || | |||||||||||| ||||||||||| Sbjct 871 TCGTCATTGTCGGAGATGTAGGTATCCAGCAGCACCGAGTAGGTCTCGGAGTGGATGTTC 812 Query 794638 TCGATGGCGATCTGGAAGCCATAAAA 794663 || || | |||||| || || || Sbjct 811 TCCATCATCAGCTGGAACCCGTAGAA 786 Score = 122 bits (134), Expect = 1e-21 Identities = 187/267 (70%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 |||||||| | | || ||| |||||||||| || ||||||||| |||||||||| Sbjct 778 GCCTCGGGAATCTTCACGTCCGTCATGAAGCGCTGAGCGAGGTTCTCAATCACGATGCCG 719 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 |||||| | || || ||||| | |||| |||||| ||||| |||| | || | ||| Sbjct 718 TCGCTGCCAGCAAAGAAGGCCAACACGTACTTGATGAAGTGCTGCTCACCCTCCGTCAGC 659 Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329 ||||||| ||| |||| || ||||| | ||| || ||||| | | || | Sbjct 658 TTCACCCAGTCAACCAGGTCGTTCCCCAGGTCAATCTCTTCCAACGTCCAGATGCAGCTC 599 Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCGA 796389 || || |||||| | ||| || ||||| |||| |||||||| || ||||| Sbjct 598 TCCTGCTCCTTGTACTTGCGCCAGATGTCGTGGTACTGGATCGGGAACAGCACGAAGCGG 539 Query 796390 TTGGGGTTCTCGCGTAGCAGCGGCTCG 796416 | ||||||||| | | ||||||||| Sbjct 538 TAGGGGTTCTCCTGGCGGAGCGGCTCG 512 >seq1 Length=157016 Score = 116 bits (128), Expect = 6e-20 Identities = 184/264 (70%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| || ||||| || |||| || || || |||||||||||||| || |||||||| Sbjct 23156 CTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAGACCGTTGGA 23215 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||| || || || | ||| || || | ||| | ||||| || || || Sbjct 23216 GGTACCGTTCGTACCGGCGATGTAACTACCGGAAGAGCGGATGTTGTGAACGTGGAACCC 23275 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || ||||||||||| |||| ||||||| || || || ||||| ||||| || Sbjct 23276 AATACCACCGGCCGCCTTACTGATGGTGGCGCACTCCTTGAGGGTGTCGTAAATGCCATC 23335 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||| |||| |||||||| ||| || ||||| || | || || || || || Sbjct 23336 GATACTGTCGTCCTTCATGGCCACGAGGAAGCAGGAACTCATCTGAGGCTTCGGGGTACC 23395 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGC 2073803 ||| ||||| || || || || || Sbjct 23396 GGCGTTGAACAGGGTAGGGGTGGC 23419 Score = 109 bits (120), Expect = 9e-18 Identities = 360/550 (65%), Gaps = 26/550 (5%) Strand=Plus/Plus Query 2069254 TCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCGGTC 2069313 ||||||||||||| ||| |||| || || || |||||||| || ||||||||||| ||| Sbjct 21756 TCGACGGTAAACTTGATCGCGTCCGCAGCGGGACGGGTGCGGAGGTAGTACATGCCCGTC 21815 Query 2069314 TTGAGGCCGCGAC-GCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCATTCGGGAC 2069372 || || || ||| |||| || | |||||| || ||||| |||| || Sbjct 21816 TTCAGTCCA-GACTGCCAGCAGTGGAAGTGCATGGAGGTGATA----CGGCCGGAGGAGG 21870 Query 2069373 GGCACA----GTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCG 2069428 ||| | ||||||||| | ||||| |||||| | ||| |||||| | || | Sbjct 21871 GGCTCTCGAGGTAGAGGTTCATGGACTGCGACTGGTCAATATACTTGGCGCGGGCCGCGG 21930 Query 2069429 CCATGTCGAT--GGTCACGCGGTTGGACACCTCCCACACGGTCTTGAACAGGGCCTTGAG 2069486 |||| ||||| | | |||| | ||| | |||||||||||| | | || |||||| Sbjct 21931 CCATATCGATCAGCTGACGCTG--GGAGATCTCCCACACGGTGCGGTAGAGCTCCTTGAT 21988 Query 2069487 ATG--CGGCGGCACCTCGTCGTCATCAAAGCCCTGC-ACCGAGCCCTGCGCTGCGATGAG 2069543 | ||| | ||| || || || || || || ||||| | | ||||| Sbjct 21989 GTCGTCGGGGATACC----CGCCA-CA----CCAGCGACGGAGCCGTTGAAGGTGATGAT 22039 Query 2069544 GCGGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGCG 2069603 || || | || |||||||| |||| || | | | || || | Sbjct 22040 TTCGTTACGGATCTCATCGTTCCACAGGTTGCGCTTGATGAGGTCCATCACGAGATACTT 22099 Query 2069604 GTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGAC 2069663 ||| ||||| | || || || ||||| || || ||| ||||| ||||| | Sbjct 22100 GTTCACCACCGGGAACTCACCGCTCAGCACACGACGGACGTAAATGTTCGACGTGAAGGG 22159 Query 2069664 CTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCAC 2069723 |||| | |||| |||| ||||| ||||| || || | ||| ||||||||| |||||| Sbjct 22160 CTCGAAGCACTCGTTGTTACCCAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGCGCCAG 22219 Query 2069724 GAGCAGCGAGTTGCGCAGGCCGTACTGTCGCACCAGCGCCCGCAGGGCGTCCCAGTCCCA 2069783 ||| || ||||| |||| || | || || || | ||||| ||||||| ||| Sbjct 22220 GAGGAGGGAGTTACGCAACCCCTTCTCCATGACACGCTTCTTGAGGGCATCCCAGTTCCA 22279 Query 2069784 GCGGCCGCTC 2069793 |||||||||| Sbjct 22280 GCGGCCGCTC 22289 Score = 96.9 bits (106), Expect = 5e-14 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936 |||| ||| ||||||| |||||||| || || | |||||||| ||| ||| |||| Sbjct 23020 TCCAAAGGGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTTTCGCTTCA 23079 Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996 || || | |||| | |||||||||||||||||| ||||| ||| ||||| |||| Sbjct 23080 GGCGGACGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCT 23139 Query 2071997 TGCGCTTGCCGCCGCC 2072012 | ||||| ||||| || Sbjct 23140 TACGCTTACCGCCACC 23155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915649000465424